MDP0000124672 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000124672 T050314_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.864 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000124672 bHLH 184 232

Links

Other bHLH family TFs
Other Malus domestica TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J27306 Panicum virgatum Pavir.J27306 I 0.899
chr2.CM0021.430.nc Lotus japonicus chr2.CM0021.430.nc I 0.895
VIT_00s0927g00010 Vitis vinifera VIT_00s0927g00010 I 0.877
TCM_000894 Theobroma cacao TCM_000894 I 0.877
Ciclev10027504m.g Citrus clementina Ciclev10027504m.g I 0.877
orange1.1g026436m.g Citrus sinensis orange1.1g026436m.g I 0.877
Gorai.003G034600 Gossypium raimondii Gorai.003G034600 I 0.877
GLYMA07G30420 Glycine max GLYMA07G30420 I 0.877
VIT_00s0824g00020 Vitis vinifera VIT_00s0824g00020 I 0.877
gene07355-v1.0-hybrid Fragaria vesca gene07355-v1.0-hybrid I 0.874
Gorai.008G087600 Gossypium raimondii Gorai.008G087600 I 0.874
Ca_22309 Cicer arietinum Ca_22309 I 0.871
GLYMA01G40600 Glycine max GLYMA01G40600 I 0.869
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.866
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.866
MDP0000318216 Malus domestica MDP0000318216 I 0.866
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.866
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.865
GSMUA_Achr8G05170_001 Musa acuminata GSMUA_Achr8G05170_001 I 0.865
MDP0000174149 Malus domestica MDP0000174149 I 0.864
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.864
Pm002305 Prunus mume Pm002305 I 0.864
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.864
MDP0000291132 Malus domestica MDP0000291132 I 0.864
Cla000123 Citrullus lanatus Cla000123 I 0.864
MDP0000170202 Malus domestica MDP0000170202 I 0.864
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.864
PK09122.1 Cannabis sativa PK09122.1 I 0.864
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.864
TCM_000895 Theobroma cacao TCM_000895 I 0.864
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.864
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.864
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.864
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.864
Pm021008 Prunus mume Pm021008 I 0.864
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.864
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.864
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.864
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.864
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.864
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.864
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.864
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.864
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.864
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.864
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.864
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.864
Bo4g150960 Brassica oleracea Bo4g150960 I 0.864
29804.m001498 Ricinus communis 29804.m001498 I 0.864
28179.m000479 Ricinus communis 28179.m000479 I 0.864
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.864
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.864
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.864
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.864
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.864
28179.m000478 Ricinus communis 28179.m000478 I 0.864
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.864
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.864
Gorai.007G229000 Gossypium raimondii Gorai.007G229000 I 0.864
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.864
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.864
MDP0000502440 Malus domestica MDP0000502440 I 0.864
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.864
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.864
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.864
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.864
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.864
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.864
Bra039924 Brassica rapa Bra039924 I 0.864
Bra030210 Brassica rapa Bra030210 I 0.864
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.864
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.864
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.864
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.864
MDP0000159571 Malus domestica MDP0000159571 I 0.864
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.864
OBART03G32580 Oryza barthii OBART03G32580 I 0.864
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.864
PK11573.1 Cannabis sativa PK11573.1 I 0.864
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.864
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.864
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.864
Si036393m.g Setaria italica Si036393m.g I 0.864
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.864
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.864
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.864
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.864
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.864
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.864
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.864
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.864
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.864
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.864
OS03G0725800 Oryza sativa OS03G0725800 I 0.864
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.864
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.864
Lus10039640.g Linum usitatissimum Lus10039640.g I 0.862
TCM_006357 Theobroma cacao TCM_006357 I 0.861
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.861
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.861
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.861
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.861
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.861
chr5.CM0158.350.nd Lotus japonicus chr5.CM0158.350.nd I 0.860
chr3.LjT47G05.50.nc Lotus japonicus chr3.LjT47G05.50.nc I 0.860
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.860
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.856
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.856
Bra013128 Brassica rapa Bra013128 I 0.855
Bo3g153150 Brassica oleracea Bo3g153150 I 0.853
GSMUA_Achr3G30620_001 Musa acuminata GSMUA_Achr3G30620_001 I 0.853
GLYMA08G06831 Glycine max GLYMA08G06831 I 0.853
Bra011790 Brassica rapa Bra011790 I 0.853
GLYMA07G13406 Glycine max GLYMA07G13406 N 0.853
Bra010617 Brassica rapa Bra010617 I 0.853
Thhalv10025715m.g Eutrema salsugineum Thhalv10025715m.g I 0.853
Carubv10006834m.g Capsella rubella Carubv10006834m.g I 0.853
Cagra.6066s0006 Capsella grandiflora Cagra.6066s0006 I 0.853
Bo1g003350 Brassica oleracea Bo1g003350 I 0.853
BHLH25 Arabidopsis thaliana AT4G37850 I 0.853
SapurV1A.0821s0050 Salix purpurea SapurV1A.0821s0050 I 0.849
GLYMA01G40620 Glycine max GLYMA01G40620 I 0.849
GSMUA_Achr4G23070_001 Musa acuminata GSMUA_Achr4G23070_001 I 0.849
MTR_5g014520 Medicago truncatula MTR_5g014520 I 0.849
Ca_02263 Cicer arietinum Ca_02263 I 0.849
Ca_02264 Cicer arietinum Ca_02264 I 0.849
GSMUA_Achr6G35730_001 Musa acuminata GSMUA_Achr6G35730_001 I 0.847
Pm002304 Prunus mume Pm002304 I 0.844
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.844
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.844
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.844
F775_11371 Aegilops tauschii F775_11371 I 0.844
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.844
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.844
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.844
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.844
VIT_07s0205g00190 Vitis vinifera VIT_07s0205g00190 I 0.842
chr2.CM0021.380.nc Lotus japonicus chr2.CM0021.380.nc I 0.842
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I 0.840
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I 0.840
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I 0.840
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I 0.840
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.840
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I 0.840
Eucgr.H02398 Eucalyptus grandis Eucgr.H02398 I 0.840
Cla014288 Citrullus lanatus Cla014288 I 0.839
Cucsa.103630 Cucumis sativus Cucsa.103630 I 0.838
PDK_20s1524891g001 Phoenix dactylifera PDK_20s1524891g001 I 0.838