MDP0000138721 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000138721 T050324_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.861 0.939
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000138721 bHLH 88 136

Links

Other bHLH family TFs
Other Malus domestica TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mgf000445m Mimulus guttatus mgf000445m I 0.861
Cucsa.102530 Cucumis sativus Cucsa.102530 I 0.861
cassava47359.m1 Manihot esculenta cassava47359.m1 I 0.861
Aquca_007_00702 Aquilegia coerulea Aquca_007_00702 I 0.861
Bostr.7867s1578 Boechera stricta Bostr.7867s1578 I 0.861
Carubv10005083m.g Capsella rubella Carubv10005083m.g I 0.861
Cagra.4909s0047 Capsella grandiflora Cagra.4909s0047 I 0.861
cassava44831.m1 Manihot esculenta cassava44831.m1 I 0.861
30170.m013852 Ricinus communis 30170.m013852 I 0.861
VIT_18s0001g10270 Vitis vinifera VIT_18s0001g10270 I 0.861
VIT_07s0031g00450 Vitis vinifera VIT_07s0031g00450 I 0.861
AMTR_s00046p00066610 Amborella trichopoda AMTR_s00046p00066610 I 0.861
Ca_02162 Cicer arietinum Ca_02162 I 0.861
Cla000718 Citrullus lanatus Cla000718 I 0.861
30115.m001235 Ricinus communis 30115.m001235 I 0.861
Pm026389 Prunus mume Pm026389 I 0.861
Ciclev10025735m.g Citrus clementina Ciclev10025735m.g I 0.861
Eucgr.I00906 Eucalyptus grandis Eucgr.I00906 I 0.861
SapurV1A.0423s0130 Salix purpurea SapurV1A.0423s0130 I 0.861
SapurV1A.0167s0140 Salix purpurea SapurV1A.0167s0140 I 0.861
orange1.1g036669m.g Citrus sinensis orange1.1g036669m.g I 0.861
SapurV1A.0603s0060 Salix purpurea SapurV1A.0603s0060 I 0.861
Thhalv10025554m.g Eutrema salsugineum Thhalv10025554m.g I 0.861
LjT43O20.130.nd Lotus japonicus LjT43O20.130.nd I 0.861
PK27964.1 Cannabis sativa PK27964.1 I 0.861
MDP0000523812 Malus domestica MDP0000523812 I 0.861
MDP0000215587 Malus domestica MDP0000215587 I 0.861
gene23819-v1.0-hybrid Fragaria vesca gene23819-v1.0-hybrid I 0.861
evm.TU.supercontig_21.176 Carica papaya evm.TU.supercontig_21.176 I 0.861
Gorai.007G214800 Gossypium raimondii Gorai.007G214800 I 0.861
Gorai.009G213800 Gossypium raimondii Gorai.009G213800 I 0.861
Lus10041592.g Linum usitatissimum Lus10041592.g I 0.861
Lus10024811.g Linum usitatissimum Lus10024811.g I 0.861
TCM_000649 Theobroma cacao TCM_000649 I 0.861
TCM_033802 Theobroma cacao TCM_033802 I 0.861
Bra010591 Brassica rapa Bra010591 I 0.861
GLYMA14G09231 Glycine max GLYMA14G09231 I 0.861
Bo3g153630 Brassica oleracea Bo3g153630 I 0.861
Bra011740 Brassica rapa Bra011740 I 0.861
BRADI1G48400 Brachypodium distachyon BRADI1G48400 I 0.861
MTR_5g017040 Medicago truncatula MTR_5g017040 I 0.861
GSMUA_Achr10G09040_001 Musa acuminata GSMUA_Achr10G09040_001 I 0.861
SPT Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000292 I 0.861
Bo1g004970 Brassica oleracea Bo1g004970 I 0.861
PGSC0003DMG400004011 Solanum tuberosum PGSC0003DMG400004011 I 0.861
GLYMA17G35951 Glycine max GLYMA17G35951 I 0.861
SPT Arabidopsis thaliana AT4G36930 D 0.861
Solyc02g093280.2 Solanum lycopersicum Solyc02g093280.2 I 0.861
PRUPE_ppa021918mg Prunus persica PRUPE_ppa021918mg I 0.861
PRUPE_ppa014897mg Prunus persica PRUPE_ppa014897mg I 0.861
GLYMA01G39451 Glycine max GLYMA01G39451 I 0.861
POPTR_0005s18280 Populus trichocarpa POPTR_0005s18280 I 0.861
POPTR_0014s02590 Populus trichocarpa POPTR_0014s02590 I 0.861
GSMUA_Achr8G15670_001 Musa acuminata GSMUA_Achr8G15670_001 I 0.861
Gorai.008G077300 Gossypium raimondii Gorai.008G077300 I 0.859
mg025182m Mimulus guttatus mg025182m I 0.849
cassava35035.m1 Manihot esculenta cassava35035.m1 I 0.849
orange1.1g022782m.g Citrus sinensis orange1.1g022782m.g I 0.849
Solyc04g078690.2 Solanum lycopersicum Solyc04g078690.2 I 0.849
GSMUA_Achr7G20810_001 Musa acuminata GSMUA_Achr7G20810_001 I 0.848
BGIOSGA005408 Oryza indica BGIOSGA005408 I 0.840
OB02G43130 Oryza brachyantha OB02G43130 I 0.840
ORUFI02G37990 Oryza rufipogon ORUFI02G37990 I 0.840
OS02G0805250 Oryza sativa OS02G0805250 I 0.840
Sb04g036450 Sorghum bicolor Sb04g036450 I 0.840
Si017762m.g Setaria italica Si017762m.g I 0.840
ORGLA02G0316800 Oryza glaberrima ORGLA02G0316800 I 0.840
OPUNC02G33630 Oryza punctata OPUNC02G33630 I 0.840
OGLUM02G37650 Oryza glumaepatula OGLUM02G37650 I 0.840
OMERI02G34410 Oryza meridionalis OMERI02G34410 I 0.840
ONIVA02G38510 Oryza nivara ONIVA02G38510 I 0.840
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.840