CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000138721
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000138721
T050324_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN
NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.861
0.939
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000138721
bHLH
88
136
AEVHNLSKKRMRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy