MDP0000219146 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000219146 T050377_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRM
M09784_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ICE1_01 		0.890 0.958
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000219146 bHLH 355 402

Links

Other bHLH family TFs
Other Malus domestica TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I 0.914
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.890
Ca_01394 Cicer arietinum Ca_01394 I 0.890
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.890
Cla002682 Citrullus lanatus Cla002682 I 0.890
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.890
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.890
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.890
Cla003283 Citrullus lanatus Cla003283 I 0.890
Pm016093 Prunus mume Pm016093 I 0.890
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.890
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.890
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.890
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.890
Pm024587 Prunus mume Pm024587 I 0.890
30147.m014419 Ricinus communis 30147.m014419 I 0.890
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.890
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.890
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.890
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.890
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.890
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.890
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.890
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.890
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.890
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.890
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.890
TCM_017336 Theobroma cacao TCM_017336 I 0.890
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.890
TCM_014741 Theobroma cacao TCM_014741 I 0.890
Si026212m.g Setaria italica Si026212m.g I 0.890
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.890
Si001874m.g Setaria italica Si001874m.g I 0.890
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.890
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.890
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.890
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.890
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.890
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.890
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.890
MDP0000304669 Malus domestica MDP0000304669 I 0.890
MDP0000662999 Malus domestica MDP0000662999 I 0.890
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.890
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.890
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.890
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.890
PK06940.1 Cannabis sativa PK06940.1 I 0.890
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.890
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.890
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.890
MDP0000247912 Malus domestica MDP0000247912 I 0.890
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.890
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.890
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.890
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.890
mgf016462m Mimulus guttatus mgf016462m I 0.890
mgf012194m Mimulus guttatus mgf012194m I 0.890
mgf015974m Mimulus guttatus mgf015974m I 0.890
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.890
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.890
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.890
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.890
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.890
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.890
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.890
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.890
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.890
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.890
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.890
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.890
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.890
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.890
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.890
F775_14780 Aegilops tauschii F775_14780 I 0.890
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.890
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.890
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.890
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.890
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.890
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.890
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.890
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.890
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.890
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.890
Bra034246 Brassica rapa Bra034246 I 0.890
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.890
Bo00285s440 Brassica oleracea Bo00285s440 I 0.890
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.890
SCRM Arabidopsis thaliana AT3G26744 D 0.890
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.890
SCRM2 Arabidopsis thaliana AT1G12860 I 0.890
Bo5g016510 Brassica oleracea Bo5g016510 I 0.890
Bo7g083870 Brassica oleracea Bo7g083870 I 0.890
Bra025226 Brassica rapa Bra025226 I 0.890
Bra032947 Brassica rapa Bra032947 I 0.890
Bra019794 Brassica rapa Bra019794 I 0.890
Bra016749 Brassica rapa Bra016749 I 0.890
Bo8g065080 Brassica oleracea Bo8g065080 I 0.890
Bo9g008020 Brassica oleracea Bo9g008020 I 0.890
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.890
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.890
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.890
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.890
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.890
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.890
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.890
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.890
OS11G0523700 Oryza sativa OS11G0523700 I 0.890
OS01G0928000 Oryza sativa OS01G0928000 I 0.890
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.890
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.890
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.890
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.890
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.890
OBART01G42600 Oryza barthii OBART01G42600 I 0.890
OBART11G15260 Oryza barthii OBART11G15260 I 0.890
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.890
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.879
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.879
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.879
Ca_23892 Cicer arietinum Ca_23892 I 0.879
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I 0.874
Si006199m.g Setaria italica Si006199m.g I 0.867
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.866
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.866
PK06841.1 Cannabis sativa PK06841.1 I 0.866
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.866
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.866
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.866
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.866
SCRM2 Arabidopsis lyrata Al_scaffold_0001_1326 I 0.864
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.863
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.863
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.863
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.863
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.860
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.860
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.860
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.860
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.860
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.860
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.860
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.860
30131.m006993 Ricinus communis 30131.m006993 I 0.855
cassava7475.valid.m1 Manihot esculenta cassava7475.valid.m1 I 0.855
GSMUA_Achr3G00640_001 Musa acuminata GSMUA_Achr3G00640_001 N 0.854
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.853
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.853
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.853
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.850
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.850
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.850
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.850
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.850
Ciclev10033428m.g Citrus clementina Ciclev10033428m.g I 0.849
orange1.1g041101m.g Citrus sinensis orange1.1g041101m.g I 0.849
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I 0.846
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.846
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.846
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.846
Cla016068 Citrullus lanatus Cla016068 I 0.846
Pm008898 Prunus mume Pm008898 I 0.846
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.846
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.846
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.846
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.846
AMTR_s00096p00160080 Amborella trichopoda AMTR_s00096p00160080 I 0.845
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.843
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.843
PGSC0003DMG400017440 Solanum tuberosum PGSC0003DMG400017440 I 0.843
Solyc05g014590.2 Solanum lycopersicum Solyc05g014590.2 I 0.843
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.840
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.840
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.840
Bra006831 Brassica rapa Bra006831 N 0.840
Bra002756 Brassica rapa Bra002756 N 0.840
Bra020462 Brassica rapa Bra020462 N 0.840
Bo3g019430 Brassica oleracea Bo3g019430 N 0.840
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.840
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.840
Bo9g130890 Brassica oleracea Bo9g130890 N 0.840