MDP0000243628 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000243628 T050389_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.839 0.583
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000243628 bHLH 152 199

Links

Other bHLH family TFs
Other Malus domestica TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30198.m000869 Ricinus communis 30198.m000869 I 0.858
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.852
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.858
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.852
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.849
AMS Arabidopsis thaliana AT2G16910 D 0.839
BHLH27 Arabidopsis thaliana AT4G29930 N 0.841
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.878
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.879
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.855
Bo1g014720 Brassica oleracea Bo1g014720 N 0.841
Bo3g019430 Brassica oleracea Bo3g019430 N 0.878
Bo3g091780 Brassica oleracea Bo3g091780 I 0.839
Bo7g016210 Brassica oleracea Bo7g016210 I 0.839
Bo7g114110 Brassica oleracea Bo7g114110 N 0.841
Bo9g130890 Brassica oleracea Bo9g130890 N 0.878
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.839
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.878
Bostr.7867s0840 Boechera stricta Bostr.7867s0840 N 0.841
Bra002004 Brassica rapa Bra002004 I 0.839
Bra002756 Brassica rapa Bra002756 N 0.878
Bra006831 Brassica rapa Bra006831 N 0.878
Bra011152 Brassica rapa Bra011152 N 0.841
Bra013041 Brassica rapa Bra013041 I 0.839
Bra020462 Brassica rapa Bra020462 N 0.878
Bra024115 Brassica rapa Bra024115 N 0.841
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.856
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.882
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.855
Cagra.0268s0010 Capsella grandiflora Cagra.0268s0010 N 0.841
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.858
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.839
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.878
Carubv10006422m.g Capsella rubella Carubv10006422m.g N 0.841
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.858
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.839
cassava2551.valid.m1 Manihot esculenta cassava2551.valid.m1 I 0.845
cassava2552.valid.m1 Manihot esculenta cassava2552.valid.m1 I 0.845
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.858
Ca_05416 Cicer arietinum Ca_05416 I 0.839
Ca_23693 Cicer arietinum Ca_23693 I 0.839
Ca_23694 Cicer arietinum Ca_23694 I 0.839
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.858
Cla016068 Citrullus lanatus Cla016068 I 0.852
Cla023112 Citrullus lanatus Cla023112 I 0.858
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.852
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.858
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.849
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.852
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.849
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.858
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.839
Eucgr.H02387 Eucalyptus grandis Eucgr.H02387 N 0.842
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.852
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.839
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.852
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.849
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.839
fgenesh2_kg.7__1196__AT4G29930.1 Arabidopsis lyrata fgenesh2_kg.7__1196__AT4G29930.1 N 0.838
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.878
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.858
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.879
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.869
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.858
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.858
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.839
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.858
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.858
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.879
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.858
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.839
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.902
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.858
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.858
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.855
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.855
GRMZM2G139372 Zea mays GRMZM2G139372 N 0.856
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.879
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.852
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.852
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.842
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.879
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.849
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.839
LPERR04G04510 Leersia perrieri LPERR04G04510 N 0.844
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.855
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.858
Lus10030880.g Linum usitatissimum Lus10030880.g N 0.866
MDP0000133262 Malus domestica MDP0000133262 I 0.858
MDP0000318229 Malus domestica MDP0000318229 I 0.858
MDP0000405748 Malus domestica MDP0000405748 I 0.839
mgf018455m Mimulus guttatus mgf018455m I 0.845
mgf019723m Mimulus guttatus mgf019723m I 0.879
mgf024029m Mimulus guttatus mgf024029m I 0.902
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.882
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.855
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.839
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.858
OBART02G01550 Oryza barthii OBART02G01550 I 0.879
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.879
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.879
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.855
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.855
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.879
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.879
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.855
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.858
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.879
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.879
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.855
TDR Oryza sativa OS02G0120500 I 0.879
OS04G0301500 Oryza sativa OS04G0301500 N 0.855
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.882
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.854
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.855
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.855
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.852
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.858
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.852
PK03241.1 Cannabis sativa PK03241.1 I 0.839
Pm020879 Prunus mume Pm020879 I 0.869
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.849
AMS Populus trichocarpa POPTR_0009s13860 I 0.869
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.858
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.869
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.847
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.858
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.869
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.882
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.855
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.852
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.852
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.852
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.852
Si006500m.g Setaria italica Si006500m.g I 0.879
Si010413m.g Setaria italica Si010413m.g N 0.855
Si010812m.g Setaria italica Si010812m.g N 0.855
Si019518m.g Setaria italica Si019518m.g I 0.882
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.858
TCM_006602 Theobroma cacao TCM_006602 I 0.839
TCM_039471 Theobroma cacao TCM_039471 I 0.858
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.878
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.839
Thhalv10027332m.g Eutrema salsugineum Thhalv10027332m.g N 0.841
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.855
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.855
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.882
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.858
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.839
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.858