MDP0000318216 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000318216 T050448_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.912 0.857
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.882 0.633
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.858 0.612
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.858 0.612
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.858 0.612
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.858 0.592
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.858 0.592
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.846 0.592
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000318216 bHLH 359 407

Links

Other bHLH family TFs
Other Malus domestica TFs

527 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aqu1.227096 Amphimedon queenslandica Aqu1.227096 N 0.000
ASIM_0001224701 Anisakis simplex ASIM_0001224701 I 0.000
BN946_scf184355.g3 Trametes cinnabarina BN946_scf184355.g3 I 0.000
BXY_0622200 Bursaphelenchus xylophilus BXY_0622200 I 0.000
DILT_0000534401 Diphyllobothrium latum DILT_0000534401 I 0.000
ECANG7_06581 Echinococcus canadensis ECANG7_06581 I 0.000
ECPE_0001225801 Echinostoma caproni ECPE_0001225801 I 0.000
EmuJ_000915650 Echinococcus multilocularis EmuJ_000915650 I 0.000
ENSONIG00000018347 Oreochromis niloticus ENSONIG00000018347 I 0.000
HelroG138724 Helobdella robusta HelroG138724 I 0.000
HMEL025049 Heliconius melpomene HMEL025049 I 0.000
HmN_000028700 Hymenolepis microstoma HmN_000028700 I 0.000
KGM_13131 Danaus plexippus KGM_13131 I 0.000
L596_g14232 Steinernema carpocapsae L596_g14232 I 0.000
L889_g7378 Steinernema feltiae L889_g7378 I 0.000
L898_g2678 Steinernema monticolum L898_g2678 I 0.000
MCINX005605 Melitaea cinxia MCINX005605 I 0.000
nRc.2.0.1.g30457 Romanomermis culicivorax nRc.2.0.1.g30457 I 0.000
PTRK_0000181700 Parastrongyloides trichosuri PTRK_0000181700 I 0.000
Q86SD7_PODCA Podocoryne carnea Q86SD7_PODCA D 0.000
RSKR_0000821700 Rhabditophanes kr3021 RSKR_0000821700 N 0.000
SPER_0001880401 Spirometra erinaceieuropaei SPER_0001880401 I 0.000
SPER_0003105501 Spirometra erinaceieuropaei SPER_0003105501 I 0.000
SSTP_0000092200 Strongyloides stercoralis SSTP_0000092200 I 0.000
SVE_0701500 Strongyloides venezuelensis SVE_0701500 N 0.000
TASK_0000469001 Taenia asiatica TASK_0000469001 I 0.000
TsM_000611800 Taenia solium TsM_000611800 I 0.000
TsM_000892700 Taenia solium TsM_000892700 I 0.000
TTAC_0000915701 Hydatigera taeniaeformis TTAC_0000915701 I 0.000