CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000779358
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000779358
T050508_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000779358
bHLH
152
203
ATDSHSLAERVRRGKINERLKCLQDIVPGCSNKTMGMAVMLDEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla019256
Citrullus lanatus
Cla019256
I
0.886
Pm025178
Prunus mume
Pm025178
I
0.886
29974.m000242
Ricinus communis
29974.m000242
I
0.886
VIT_17s0000g03580
Vitis vinifera
VIT_17s0000g03580
I
0.886
TCM_012362
Theobroma cacao
TCM_012362
I
0.886
POPTR_0015s03760
Populus trichocarpa
POPTR_0015s03760
I
0.886
PRUPE_ppa015301mg
Prunus persica
PRUPE_ppa015301mg
I
0.886
Cucsa.111110
Cucumis sativus
Cucsa.111110
I
0.886
mgf013353m
Mimulus guttatus
mgf013353m
I
0.886
Gorai.006G194500
Gossypium raimondii
Gorai.006G194500
I
0.886
SapurV1A.0530s0010
Salix purpurea
SapurV1A.0530s0010
I
0.886
MDP0000879337
Malus domestica
MDP0000879337
I
0.886
Gorai.006G060400
Gossypium raimondii
Gorai.006G060400
I
0.886
SapurV1A.0719s0010
Salix purpurea
SapurV1A.0719s0010
I
0.886
SapurV1A.1621s0020
Salix purpurea
SapurV1A.1621s0020
I
0.886
Eucgr.B00731
Eucalyptus grandis
Eucgr.B00731
I
0.886
POPTR_0012s05210
Populus trichocarpa
POPTR_0012s05210
I
0.886
Cla018783
Citrullus lanatus
Cla018783
I
0.886
Lus10009673.g
Linum usitatissimum
Lus10009673.g
I
0.883
GLYMA07G10311
Glycine max
GLYMA07G10311
I
0.883
Ca_13025
Cicer arietinum
Ca_13025
I
0.883
GLYMA09G31580
Glycine max
GLYMA09G31580
I
0.883
Lus10009034.g
Linum usitatissimum
Lus10009034.g
I
0.883
gene25151-v1.0-hybrid
Fragaria vesca
gene25151-v1.0-hybrid
I
0.875
Gorai.007G005700
Gossypium raimondii
Gorai.007G005700
I
0.874
PGSC0003DMG400005388
Solanum tuberosum
PGSC0003DMG400005388
I
0.874
Solyc12g036470.1
Solanum lycopersicum
Solyc12g036470.1
I
0.874
Lus10038939.g
Linum usitatissimum
Lus10038939.g
N
0.866
mgf017044m
Mimulus guttatus
mgf017044m
I
0.862
Eucgr.K02229
Eucalyptus grandis
Eucgr.K02229
I
0.862
Carubv10020802m.g
Capsella rubella
Carubv10020802m.g
N
0.860
Bostr.3288s0027
Boechera stricta
Bostr.3288s0027
N
0.860
Cagra.0876s0016
Capsella grandiflora
Cagra.0876s0016
N
0.860
evm.TU.supercontig_3.503
Carica papaya
evm.TU.supercontig_3.503
N
0.860
Gorai.001G074900
Gossypium raimondii
Gorai.001G074900
I
0.860
BEE3
Arabidopsis thaliana
AT1G73830
N
0.860
Solyc03g119390.2
Solanum lycopersicum
Solyc03g119390.2
N
0.860
PGSC0003DMG400005725
Solanum tuberosum
PGSC0003DMG400005725
N
0.860
BEE3
Arabidopsis lyrata
fgenesh2_kg.2__1650__AT1G73830.1
N
0.860
MTR_6g084120
Medicago truncatula
MTR_6g084120
N
0.859
Aquca_041_00009
Aquilegia coerulea
Aquca_041_00009
I
0.859
GLYMA05G35060
Glycine max
GLYMA05G35060
N
0.857
chr4.CM0042.750.nc
Lotus japonicus
chr4.CM0042.750.nc
N
0.857
GLYMA08G04661
Glycine max
GLYMA08G04661
N
0.857
AMTR_s00079p00137860
Amborella trichopoda
AMTR_s00079p00137860
I
0.850
Gorai.008G055400
Gossypium raimondii
Gorai.008G055400
I
0.847
Bo2g080780
Brassica oleracea
Bo2g080780
N
0.847
TCM_019445
Theobroma cacao
TCM_019445
I
0.847
BEE1
Arabidopsis thaliana
AT1G18400
N
0.847
GLYMA17G34010
Glycine max
GLYMA17G34010
N
0.847
Thhalv10008517m.g
Eutrema salsugineum
Thhalv10008517m.g
N
0.847
fgenesh1_pm.C_scaffold_1001571
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001571
N
0.847
Bo5g025360
Brassica oleracea
Bo5g025360
N
0.847
Carubv10009894m.g
Capsella rubella
Carubv10009894m.g
N
0.847
Cagra.0909s0019
Capsella grandiflora
Cagra.0909s0019
N
0.847
Bra015960
Brassica rapa
Bra015960
N
0.847
Thhalv10019010m.g
Eutrema salsugineum
Thhalv10019010m.g
N
0.847
Bo6g118140
Brassica oleracea
Bo6g118140
N
0.847
Bra008113
Brassica rapa
Bra008113
N
0.847
Bra025910
Brassica rapa
Bra025910
N
0.847
Bostr.7128s0442
Boechera stricta
Bostr.7128s0442
N
0.847
cassava32072.m1
Manihot esculenta
cassava32072.m1
N
0.845
orange1.1g042908m.g
Citrus sinensis
orange1.1g042908m.g
I
0.841
Pm029081
Prunus mume
Pm029081
I
0.841
Bra010993
Brassica rapa
Bra010993
I
0.841
Bo3g138670
Brassica oleracea
Bo3g138670
I
0.841
PRUPE_ppa010885mg
Prunus persica
PRUPE_ppa010885mg
I
0.841
Bostr.12659s0424
Boechera stricta
Bostr.12659s0424
I
0.841
evm.TU.supercontig_65.44
Carica papaya
evm.TU.supercontig_65.44
I
0.841
MDP0000725991
Malus domestica
MDP0000725991
I
0.841