orange1.1g011621m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g011621m.g T050544_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.914 0.980
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.914 0.980
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.902 0.961
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.902 0.902
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.902 0.902
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.902 0.902
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.888 0.941
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.875 0.882
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.875 0.882
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864 0.843
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864 0.824
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864 0.824
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.842 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g011621m bHLH 289 339

Links

Other bHLH family TFs
Other Citrus sinensis TFs

901 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000000176 Ailuropoda melanoleuca ENSAMEG00000000176 N 0.000
ENSMPUG00000007415 Mustela putorius furo ENSMPUG00000007415 N 0.000
ENSNLEG00000010836 Nomascus leucogenys ENSNLEG00000010836 N 0.000
ENSOARG00000004631 Ovis aries ENSOARG00000004631 N 0.000
ENSP00000333802 Macaca fascicularis ENSP00000333802 N 0.000
ENSPANG00000007896 Papio anubis ENSPANG00000007896 N 0.000
ENSPPYG00000009842 Pongo abelii ENSPPYG00000009842 N 0.000
ZNF599 Equus caballus ENSECAG00000013471 N 0.000
ZNF599 Canis familiaris ENSCAFG00000030117 N 0.000
ZNF599 Macaca mulatta ENSMMUG00000006440 N 0.000
ZNF599 Gorilla gorilla ENSGGOG00000012378 N 0.000
ZNF599 Pan troglodytes ENSPTRG00000010820 N 0.000
ZNF599 Tupaia belangeri ENSTBEG00000005491 N 0.000
ZNF599 Tursiops truncatus ENSTTRG00000002936 N 0.000
ZNF599 Homo sapiens ENSG00000153896 N 0.000