orange1.1g041101m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g041101m.g T050614_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRM
M09784_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ICE1_01 		0.849 0.694
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g041101m bHLH 267 315

Links

Other bHLH family TFs
Other Citrus sinensis TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10033428m.g Citrus clementina Ciclev10033428m.g I 0.914
SCRM2 Arabidopsis lyrata Al_scaffold_0001_1326 I 0.876
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.849
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.849
30147.m014419 Ricinus communis 30147.m014419 I 0.849
Pm016093 Prunus mume Pm016093 I 0.849
Cla003283 Citrullus lanatus Cla003283 I 0.849
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.849
Pm024587 Prunus mume Pm024587 I 0.849
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.849
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I 0.849
mgf012194m Mimulus guttatus mgf012194m I 0.849
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.849
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.849
Cla002682 Citrullus lanatus Cla002682 I 0.849
mgf015974m Mimulus guttatus mgf015974m I 0.849
Ca_23892 Cicer arietinum Ca_23892 I 0.849
TCM_017336 Theobroma cacao TCM_017336 I 0.849
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.849
TCM_014741 Theobroma cacao TCM_014741 I 0.849
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.849
Si001874m.g Setaria italica Si001874m.g I 0.849
Si026212m.g Setaria italica Si026212m.g I 0.849
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.849
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.849
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.849
Ca_01394 Cicer arietinum Ca_01394 I 0.849
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.849
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.849
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.849
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.849
mgf016462m Mimulus guttatus mgf016462m I 0.849
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.849
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.849
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.849
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.849
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.849
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.849
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.849
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.849
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.849
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.849
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.849
PK06940.1 Cannabis sativa PK06940.1 I 0.849
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.849
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.849
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.849
MDP0000662999 Malus domestica MDP0000662999 I 0.849
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.849
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.849
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.849
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.849
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.849
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.849
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.849
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.849
MDP0000247912 Malus domestica MDP0000247912 I 0.849
MDP0000304669 Malus domestica MDP0000304669 I 0.849
MDP0000219146 Malus domestica MDP0000219146 I 0.849
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.849
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.849
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.849
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.849
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.849
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.849
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.849
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.849
F775_14780 Aegilops tauschii F775_14780 I 0.849
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.849
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.849
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.849
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.849
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.849
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.849
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.849
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.849
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.849
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.849
Bra034246 Brassica rapa Bra034246 I 0.849
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.849
Bo00285s440 Brassica oleracea Bo00285s440 I 0.849
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.849
SCRM Arabidopsis thaliana AT3G26744 D 0.849
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.849
SCRM2 Arabidopsis thaliana AT1G12860 I 0.849
Bo5g016510 Brassica oleracea Bo5g016510 I 0.849
Bo7g083870 Brassica oleracea Bo7g083870 I 0.849
Bra025226 Brassica rapa Bra025226 I 0.849
Bra032947 Brassica rapa Bra032947 I 0.849
Bra019794 Brassica rapa Bra019794 I 0.849
Bra016749 Brassica rapa Bra016749 I 0.849
Bo8g065080 Brassica oleracea Bo8g065080 I 0.849
Bo9g008020 Brassica oleracea Bo9g008020 I 0.849
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.849
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.849
OS11G0523700 Oryza sativa OS11G0523700 I 0.849
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.849
OS01G0928000 Oryza sativa OS01G0928000 I 0.849
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.849
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.849
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.849
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.849
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.849
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.849
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.849
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.849
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.849
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.849
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.849
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.849
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.849
OBART11G15260 Oryza barthii OBART11G15260 I 0.849
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.849
OBART01G42600 Oryza barthii OBART01G42600 I 0.849
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.849
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.849
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.849
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.849
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.849
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.849
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.849
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.849
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.849
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.849
PRUPE_ppa002978mg Prunus persica PRUPE_ppa002978mg I 0.845
evm.TU.supercontig_69.52 Carica papaya evm.TU.supercontig_69.52 N 0.843
MDP0000790939 Malus domestica MDP0000790939 N 0.841