orange1.1g047850m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g047850m.g T050635_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g047850m bHLH 120 165

Links

Other bHLH family TFs
Other Citrus sinensis TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00071p00111940 Amborella trichopoda AMTR_s00071p00111940 N 0.891
PGSC0003DMG400018986 Solanum tuberosum PGSC0003DMG400018986 N 0.883
Cagra.1261s0004 Capsella grandiflora Cagra.1261s0004 N 0.879
Ca_09667 Cicer arietinum Ca_09667 N 0.879
gene17881-v1.0-hybrid Fragaria vesca gene17881-v1.0-hybrid N 0.879
TCM_001435 Theobroma cacao TCM_001435 N 0.879
Cla008578 Citrullus lanatus Cla008578 N 0.879
IND1 Arabidopsis lyrata fgenesh2_kg.6__3690__AT4G00120.1 N 0.879
MDP0000711774 Malus domestica MDP0000711774 N 0.879
Pm001707 Prunus mume Pm001707 N 0.879
Lus10005710.g Linum usitatissimum Lus10005710.g N 0.879
MTR_3g101810 Medicago truncatula MTR_3g101810 N 0.879
PRUPE_ppa021410mg Prunus persica PRUPE_ppa021410mg N 0.879
PRUPE_ppa022938mg Prunus persica PRUPE_ppa022938mg N 0.879
Ca_02154 Cicer arietinum Ca_02154 N 0.879
GLYMA04G39210 Glycine max GLYMA04G39210 N 0.879
HEC3 Vitis vinifera VIT_04s0044g01040 N 0.879
SapurV1A.0550s0030 Salix purpurea SapurV1A.0550s0030 N 0.879
SapurV1A.0352s0020 Salix purpurea SapurV1A.0352s0020 N 0.879
MTR_8g093500 Medicago truncatula MTR_8g093500 N 0.879
Eucgr.H04946 Eucalyptus grandis Eucgr.H04946 N 0.879
GLYMA08G16570 Glycine max GLYMA08G16570 N 0.879
GLYMA06G15730 Glycine max GLYMA06G15730 N 0.879
Pm026380 Prunus mume Pm026380 N 0.879
VIT_18s0001g10400 Vitis vinifera VIT_18s0001g10400 N 0.879
GLYMA05G32410 Glycine max GLYMA05G32410 N 0.879
Carubv10003163m.g Capsella rubella Carubv10003163m.g N 0.879
Lus10042647.g Linum usitatissimum Lus10042647.g N 0.879
Solyc12g088790.1 Solanum lycopersicum Solyc12g088790.1 N 0.879
Aquca_022_00317 Aquilegia coerulea Aquca_022_00317 N 0.879
PGSC0003DMG400028657 Solanum tuberosum PGSC0003DMG400028657 N 0.879
Cucsa.101020 Cucumis sativus Cucsa.101020 N 0.879
cassava5871.m1 Manihot esculenta cassava5871.m1 N 0.879
LjSGA_011209.1 Lotus japonicus LjSGA_011209.1 N 0.879
Aquca_010_00306 Aquilegia coerulea Aquca_010_00306 N 0.879
LjT10C23.20.nc Lotus japonicus LjT10C23.20.nc N 0.879
mgf019142m Mimulus guttatus mgf019142m N 0.879
IND Arabidopsis thaliana AT4G00120 N 0.879
Thhalv10029526m.g Eutrema salsugineum Thhalv10029526m.g N 0.879
Bo3g054830 Brassica oleracea Bo3g054830 N 0.879
POPTR_0005s06220 Populus trichocarpa POPTR_0005s06220 N 0.879
cassava15224.m1 Manihot esculenta cassava15224.m1 N 0.879
MDP0000420192 Malus domestica MDP0000420192 N 0.879
Bra000979 Brassica rapa Bra000979 N 0.879
Gorai.011G116100 Gossypium raimondii Gorai.011G116100 N 0.879
Solyc11g005780.1 Solanum lycopersicum Solyc11g005780.1 N 0.879
30136.m001043 Ricinus communis 30136.m001043 N 0.879
Bostr.14547s0021 Boechera stricta Bostr.14547s0021 N 0.879
XM_002310473.1 Populus trichocarpa POPTR_0007s03950 N 0.879
Si015349m.g Setaria italica Si015349m.g N 0.876
Eucgr.H02048 Eucalyptus grandis Eucgr.H02048 N 0.876
Si015197m.g Setaria italica Si015197m.g N 0.876
Eucgr.F03093 Eucalyptus grandis Eucgr.F03093 N 0.876
evm.TU.supercontig_49.31 Carica papaya evm.TU.supercontig_49.31 N 0.876
Eucgr.F00216 Eucalyptus grandis Eucgr.F00216 N 0.876
Eucgr.H01682 Eucalyptus grandis Eucgr.H01682 N 0.876
Sb02g026530 Sorghum bicolor Sb02g026530 N 0.876
POPTR_0005s18210 Populus trichocarpa POPTR_0005s18210 N 0.876
Gorai.003G025300 Gossypium raimondii Gorai.003G025300 N 0.876
POPTR_0002s12660 Populus trichocarpa POPTR_0002s12660 N 0.876
PGSC0003DMG400007964 Solanum tuberosum PGSC0003DMG400007964 N 0.876
Gorai.007G213700 Gossypium raimondii Gorai.007G213700 N 0.876
POPTR_0014s02720 Populus trichocarpa POPTR_0014s02720 N 0.876
gene23830-v1.0-hybrid Fragaria vesca gene23830-v1.0-hybrid N 0.876
Sb07g000910 Sorghum bicolor Sb07g000910 N 0.876
Sb07g022920 Sorghum bicolor Sb07g022920 N 0.876
Sb07g000900 Sorghum bicolor Sb07g000900 N 0.876
gene09115-v1.0-hybrid Fragaria vesca gene09115-v1.0-hybrid N 0.876
PRUPE_ppa021226mg Prunus persica PRUPE_ppa021226mg N 0.876
evm.TU.supercontig_55.142 Carica papaya evm.TU.supercontig_55.142 N 0.876
Carubv10003900m.g Capsella rubella Carubv10003900m.g N 0.876
Bostr.6864s0212 Boechera stricta Bostr.6864s0212 N 0.876
30115.m001220 Ricinus communis 30115.m001220 N 0.876
30170.m013861 Ricinus communis 30170.m013861 N 0.876
Pm005293 Prunus mume Pm005293 N 0.876
Cla022928 Citrullus lanatus Cla022928 N 0.876
Cagra.0706s0009 Capsella grandiflora Cagra.0706s0009 N 0.876
Cla020973 Citrullus lanatus Cla020973 N 0.876
cassava2779.m1 Manihot esculenta cassava2779.m1 N 0.876
Bostr.13129s0018 Boechera stricta Bostr.13129s0018 N 0.876
Bostr.0568s0128 Boechera stricta Bostr.0568s0128 N 0.876
Cucsa.396050 Cucumis sativus Cucsa.396050 N 0.876
Aquca_007_00665 Aquilegia coerulea Aquca_007_00665 N 0.876
Cucsa.352300 Cucumis sativus Cucsa.352300 N 0.876
cassava8495.m1 Manihot esculenta cassava8495.m1 N 0.876
cassava41909.m1 Manihot esculenta cassava41909.m1 N 0.876
cassava45275.m1 Manihot esculenta cassava45275.m1 N 0.876
Cagra.1085s0086 Capsella grandiflora Cagra.1085s0086 N 0.876
Ca_09282 Cicer arietinum Ca_09282 N 0.876
TCM_000632 Theobroma cacao TCM_000632 N 0.876
Carubv10027898m.g Capsella rubella Carubv10027898m.g N 0.876
TCM_033818 Theobroma cacao TCM_033818 N 0.876
Ciclev10003815m.g Citrus clementina Ciclev10003815m.g N 0.876
Solyc04g078790.2 Solanum lycopersicum Solyc04g078790.2 N 0.876
AMTR_s00008p00265010 Amborella trichopoda AMTR_s00008p00265010 N 0.876
Ciclev10026967m.g Citrus clementina Ciclev10026967m.g N 0.876
Carubv10019056m.g Capsella rubella Carubv10019056m.g N 0.876
Traes_5BL_DDC2491F7 Triticum aestivum Traes_5BL_DDC2491F7 N 0.876
VIT_07s0031g00550 Vitis vinifera VIT_07s0031g00550 N 0.876
Ca_01550 Cicer arietinum Ca_01550 N 0.876
Cagra.2428s0003 Capsella grandiflora Cagra.2428s0003 N 0.876
Gorai.009G212900 Gossypium raimondii Gorai.009G212900 N 0.876
TRIUR3_19098 Triticum urartu TRIUR3_19098 N 0.876
Traes_6AS_C1A37E015 Triticum aestivum Traes_6AS_C1A37E015 N 0.876
Traes_7DL_F43F7A9A3 Triticum aestivum Traes_7DL_F43F7A9A3 N 0.876
Si030966m.g Setaria italica Si030966m.g N 0.876
OPUNC08G15570 Oryza punctata OPUNC08G15570 N 0.876
F775_04427 Aegilops tauschii F775_04427 N 0.876
F775_52433 Aegilops tauschii F775_52433 N 0.876
SapurV1A.2123s0040 Salix purpurea SapurV1A.2123s0040 N 0.876
HEC2 Arabidopsis lyrata fgenesh2_kg.5__1376__AT3G50330.1 N 0.876
BRADI4G32060 Brachypodium distachyon BRADI4G32060 N 0.876
BRADI3G38250 Brachypodium distachyon BRADI3G38250 N 0.876
Bra037128 Brassica rapa Bra037128 N 0.876
Thhalv10004846m.g Eutrema salsugineum Thhalv10004846m.g N 0.876
BRADI3G13300 Brachypodium distachyon BRADI3G13300 N 0.876
HEC3 Arabidopsis lyrata fgenesh2_kg.6__929__AT5G09750.1 N 0.876
HEC1 Arabidopsis lyrata fgenesh2_kg.8__2711__AT5G67060.1 N 0.876
SapurV1A.0423s0010 Salix purpurea SapurV1A.0423s0010 N 0.876
GLYMA17G19830 Glycine max GLYMA17G19830 N 0.876
SapurV1A.0167s0080 Salix purpurea SapurV1A.0167s0080 N 0.876
GRMZM2G134735 Zea mays GRMZM2G134735 N 0.876
GLYMA11G05920 Glycine max GLYMA11G05920 N 0.876
GLYMA06G04380 Glycine max GLYMA06G04380 N 0.876
GLYMA01G39360 Glycine max GLYMA01G39360 N 0.876
GLYMA04G04190 Glycine max GLYMA04G04190 N 0.876
GLYMA05G19920 Glycine max GLYMA05G19920 N 0.876
Bra036801 Brassica rapa Bra036801 N 0.876
Bra036071 Brassica rapa Bra036071 N 0.876
BGIOSGA030896 Oryza indica BGIOSGA030896 N 0.876
Bo1g084640 Brassica oleracea Bo1g084640 N 0.876
Bo2g009510 Brassica oleracea Bo2g009510 N 0.876
Bo2g167880 Brassica oleracea Bo2g167880 N 0.876
BGIOSGA027780 Oryza indica BGIOSGA027780 N 0.876
BGIOSGA026828 Oryza indica BGIOSGA026828 N 0.876
HEC2 Arabidopsis thaliana AT3G50330 N 0.876
HEC3 Arabidopsis thaliana AT5G09750 N 0.876
HEC1 Arabidopsis thaliana AT5G67060 N 0.876
PK01043.1 Cannabis sativa PK01043.1 N 0.876
Bo7g064100 Brassica oleracea Bo7g064100 N 0.876
Bra028620 Brassica rapa Bra028620 N 0.876
Bra030002 Brassica rapa Bra030002 N 0.876
Thhalv10011068m.g Eutrema salsugineum Thhalv10011068m.g N 0.876
Bra012128 Brassica rapa Bra012128 N 0.876
Thhalv10015330m.g Eutrema salsugineum Thhalv10015330m.g N 0.876
Bo8g079710 Brassica oleracea Bo8g079710 N 0.876
Bo9g020420 Brassica oleracea Bo9g020420 N 0.876
Bo9g173860 Brassica oleracea Bo9g173860 N 0.876
OS09G0455300 Oryza sativa OS09G0455300 N 0.876
Pavir.J39499 Panicum virgatum Pavir.J39499 N 0.876
Lus10012670.g Linum usitatissimum Lus10012670.g N 0.876
ONIVA03G20840 Oryza nivara ONIVA03G20840 N 0.876
ONIVA08G00590 Oryza nivara ONIVA08G00590 N 0.876
ONIVA08G19790 Oryza nivara ONIVA08G19790 N 0.876
OMERI09G10060 Oryza meridionalis OMERI09G10060 N 0.876
OMERI08G00980 Oryza meridionalis OMERI08G00980 N 0.876
OGLUM08G00660 Oryza glumaepatula OGLUM08G00660 N 0.876
OGLUM08G18600 Oryza glumaepatula OGLUM08G18600 N 0.876
OGLUM09G13100 Oryza glumaepatula OGLUM09G13100 N 0.876
OPUNC08G00600 Oryza punctata OPUNC08G00600 N 0.876
mg018414m Mimulus guttatus mg018414m N 0.876
ORUFI08G19930 Oryza rufipogon ORUFI08G19930 N 0.876
ORUFI09G13650 Oryza rufipogon ORUFI09G13650 N 0.876
Gorai.010G020500 Gossypium raimondii Gorai.010G020500 N 0.876
OS08G0108500 Oryza sativa OS08G0108500 N 0.876
ORUFI08G00650 Oryza rufipogon ORUFI08G00650 N 0.876
ORGLA09G0096500 Oryza glaberrima ORGLA09G0096500 N 0.876
OPUNC09G11020 Oryza punctata OPUNC09G11020 N 0.876
ORGLA08G0155700 Oryza glaberrima ORGLA08G0155700 N 0.876
ORGLA08G0237200 Oryza glaberrima ORGLA08G0237200 N 0.876
MDP0000123893 Malus domestica MDP0000123893 N 0.876
MDP0000123894 Malus domestica MDP0000123894 N 0.876
GSMUA_Achr5G01290_001 Musa acuminata GSMUA_Achr5G01290_001 N 0.876
GSMUA_Achr6G18580_001 Musa acuminata GSMUA_Achr6G18580_001 N 0.876
Pavir.Fa00680 Panicum virgatum Pavir.Fa00680 N 0.876
GSMUA_Achr10G25590_001 Musa acuminata GSMUA_Achr10G25590_001 N 0.876
Pavir.Fa02152 Panicum virgatum Pavir.Fa02152 N 0.876
GRMZM2G471635 Zea mays GRMZM2G471635 N 0.876
Pavir.J21912 Panicum virgatum Pavir.J21912 N 0.876
Pavir.J20328 Panicum virgatum Pavir.J20328 N 0.876
Pavir.Ba02034 Panicum virgatum Pavir.Ba02034 N 0.876
orange1.1g043072m.g Citrus sinensis orange1.1g043072m.g N 0.876
MTR_5g017210 Medicago truncatula MTR_5g017210 N 0.876
MDP0000249405 Malus domestica MDP0000249405 N 0.876
OB08G10720 Oryza brachyantha OB08G10720 N 0.876
MLOC_16429 Hordeum vulgare MLOC_16429 N 0.876
LPERR09G09120 Leersia perrieri LPERR09G09120 N 0.876
orange1.1g024139m.g Citrus sinensis orange1.1g024139m.g N 0.876
LPERR08G01030 Leersia perrieri LPERR08G01030 N 0.876
LPERR08G14680 Leersia perrieri LPERR08G14680 N 0.876
GRMZM2G414252 Zea mays GRMZM2G414252 N 0.876
SapurV1A.0623s0130 Salix purpurea SapurV1A.0623s0130 N 0.866
Solyc02g090950.1 Solanum lycopersicum Solyc02g090950.1 N 0.865
Cucsa.360770 Cucumis sativus Cucsa.360770 N 0.865
PGSC0003DMG400004039 Solanum tuberosum PGSC0003DMG400004039 N 0.865
Cla015855 Citrullus lanatus Cla015855 N 0.865
POPTR_0007s10950 Populus trichocarpa POPTR_0007s10950 N 0.864
GRMZM5G817854 Zea mays GRMZM5G817854 N 0.864
GRMZM5G818776 Zea mays GRMZM5G818776 N 0.864
GRMZM5G812883 Zea mays GRMZM5G812883 N 0.864
GSMUA_Achr9G15380_001 Musa acuminata GSMUA_Achr9G15380_001 N 0.864
GRMZM2G354618 Zea mays GRMZM2G354618 N 0.864
Solyc06g062460.2 Solanum lycopersicum Solyc06g062460.2 N 0.863
PGSC0003DMG400004875 Solanum tuberosum PGSC0003DMG400004875 N 0.863
SELMODRAFT_405220 Selaginella moellendorffii SELMODRAFT_405220 N 0.859
SELMODRAFT_415047 Selaginella moellendorffii SELMODRAFT_415047 N 0.859
GSMUA_Achr8G24970_001 Musa acuminata GSMUA_Achr8G24970_001 N 0.856
gw1.67.189.1 Physcomitrella patens gw1.67.189.1 N 0.856
fgenesh1_pg.scaffold_273000011 Physcomitrella patens fgenesh1_pg.scaffold_273000011 N 0.856
GSMUA_Achr9G29130_001 Musa acuminata GSMUA_Achr9G29130_001 N 0.856
estExt_fgenesh1_pg.C_550008 Physcomitrella patens estExt_fgenesh1_pg.C_550008 N 0.856
OS01G0566800 Oryza sativa OS01G0566800 N 0.853
BRADI2G41390 Brachypodium distachyon BRADI2G41390 N 0.853
OPUNC01G20250 Oryza punctata OPUNC01G20250 N 0.853
BGIOSGA001389 Oryza indica BGIOSGA001389 N 0.853
OGLUM01G23470 Oryza glumaepatula OGLUM01G23470 N 0.853
Pavir.Ea01618 Panicum virgatum Pavir.Ea01618 N 0.853
Pavir.Eb02113 Panicum virgatum Pavir.Eb02113 N 0.853
Sb03g025570 Sorghum bicolor Sb03g025570 N 0.853
LPERR01G17090 Leersia perrieri LPERR01G17090 N 0.853
OMERI01G18460 Oryza meridionalis OMERI01G18460 N 0.853
OBART01G19850 Oryza barthii OBART01G19850 N 0.853
ONIVA01G07440 Oryza nivara ONIVA01G07440 N 0.853
ORGLA01G0163600 Oryza glaberrima ORGLA01G0163600 N 0.853
Si003753m.g Setaria italica Si003753m.g N 0.853
TRAES3BF276900020CFD_g Triticum aestivum TRAES3BF276900020CFD_g N 0.853
TRIUR3_28638 Triticum urartu TRIUR3_28638 N 0.853
Pavir.Eb02901 Panicum virgatum Pavir.Eb02901 N 0.852
Si001743m.g Setaria italica Si001743m.g N 0.852
Sb03g032520 Sorghum bicolor Sb03g032520 N 0.852
GRMZM2G111666 Zea mays GRMZM2G111666 N 0.852
Cucsa.366890 Cucumis sativus Cucsa.366890 N 0.847
Cla020499 Citrullus lanatus Cla020499 N 0.847
Lus10033488.g Linum usitatissimum Lus10033488.g N 0.844
Carubv10013989m.g Capsella rubella Carubv10013989m.g N 0.844
Ca_10121 Cicer arietinum Ca_10121 N 0.844
Cagra.1757s0024 Capsella grandiflora Cagra.1757s0024 N 0.844
Bostr.19424s0519 Boechera stricta Bostr.19424s0519 N 0.844
GLYMA08G21130 Glycine max GLYMA08G21130 N 0.844
Bo5g101160 Brassica oleracea Bo5g101160 N 0.844
BHLH87 Arabidopsis thaliana AT3G21330 N 0.844
GLYMA07G01611 Glycine max GLYMA07G01611 N 0.844
Thhalv10022273m.g Eutrema salsugineum Thhalv10022273m.g N 0.844
fgenesh2_kg.3__2354__AT3G21330.1 Arabidopsis lyrata fgenesh2_kg.3__2354__AT3G21330.1 N 0.844
Bra031275 Brassica rapa Bra031275 N 0.844
Bra001826 Brassica rapa Bra001826 N 0.843
Bo3g078540 Brassica oleracea Bo3g078540 N 0.843
PK21140.1 Cannabis sativa PK21140.1 N 0.841
mgf023933m Mimulus guttatus mgf023933m N 0.841
GSMUA_Achr8G23350_001 Musa acuminata GSMUA_Achr8G23350_001 N 0.841
cassava34914.m1 Manihot esculenta cassava34914.m1 N 0.841
GLYMA13G42900 Glycine max GLYMA13G42900 N 0.841
GLYMA15G02531 Glycine max GLYMA15G02531 N 0.841
Aquca_001_00189 Aquilegia coerulea Aquca_001_00189 N 0.841
30146.m003443 Ricinus communis 30146.m003443 N 0.841
Ca_02767 Cicer arietinum Ca_02767 N 0.841
Ciclev10026976m.g Citrus clementina Ciclev10026976m.g N 0.841
Lus10003500.g Linum usitatissimum Lus10003500.g N 0.841
Solyc03g121240.1 Solanum lycopersicum Solyc03g121240.1 N 0.841
Lus10009745.g Linum usitatissimum Lus10009745.g N 0.841
Gorai.011G069200 Gossypium raimondii Gorai.011G069200 N 0.841
Gorai.003G060900 Gossypium raimondii Gorai.003G060900 N 0.841
gene22897-v1.0-hybrid Fragaria vesca gene22897-v1.0-hybrid N 0.841
PRUPE_ppa015446mg Prunus persica PRUPE_ppa015446mg N 0.841
evm.TU.supercontig_131.7 Carica papaya evm.TU.supercontig_131.7 N 0.841
Pm030884 Prunus mume Pm030884 N 0.841
TCM_028961 Theobroma cacao TCM_028961 N 0.841
MDP0000145937 Malus domestica MDP0000145937 N 0.841
orange1.1g020172m.g Citrus sinensis orange1.1g020172m.g N 0.841
MTR_2g100490 Medicago truncatula MTR_2g100490 N 0.841
VIT_09s0002g02700 Vitis vinifera VIT_09s0002g02700 N 0.841
MDP0000166245 Malus domestica MDP0000166245 N 0.841
MTR_8g015450 Medicago truncatula MTR_8g015450 N 0.841
Sb09g027030 Sorghum bicolor Sb09g027030 N 0.839
Pavir.Ca00715 Panicum virgatum Pavir.Ca00715 N 0.839
Pavir.J21430 Panicum virgatum Pavir.J21430 N 0.839
SELMODRAFT_403406 Selaginella moellendorffii SELMODRAFT_403406 N 0.838
SELMODRAFT_411945 Selaginella moellendorffii SELMODRAFT_411945 N 0.838