Pavir.Aa02723 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Aa02723 T050652_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa02723.1.p bHLH 117 168

Links

Other bHLH family TFs
Other Panicum virgatum TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N 0.000
MYB59 Arabidopsis thaliana AT5G59780 D 0.000
TT2 Arabidopsis thaliana AT5G35550 I 0.000
MYB86 Arabidopsis thaliana AT5G26660 I 0.000
WER Arabidopsis thaliana AT5G14750 D 0.000
MYB27 Arabidopsis thaliana AT3G53200 D 0.000
MYB94 Arabidopsis thaliana AT3G47600 D 0.000
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.000
MYB114 Arabidopsis thaliana AT1G66380 I 0.000
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.000
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.000
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.000
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.000
Bo5g131980 Brassica oleracea Bo5g131980 N 0.000
PK27824.1 Cannabis sativa PK27824.1 N 0.000
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.000
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.000
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.000
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.000
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N 0.000
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.000
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.000
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.000
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.000
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.000
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.000
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.000
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.000
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.000
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.000
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.000
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.000
MDP0000475808 Malus domestica MDP0000475808 N 0.000
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.000
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.000
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.000
mgf001247m Mimulus guttatus mgf001247m N 0.000
OBART12G16130 Oryza barthii OBART12G16130 N 0.000
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.000
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.000
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.000
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.000
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.000
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.000
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.000
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.000
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.000
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N 0.000
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.000
Pm029438 Prunus mume Pm029438 N 0.000
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.000
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.000
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.000
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.000
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.000
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.000
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.000
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.000
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.000
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.000
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.000
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.000
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.000
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.000
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.000
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.000
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.000