CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa03509
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Aa03509
T050654_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa03509.1.p
bHLH
38
87
KSKACREKMRRDRLNDRFLELSSVMNPGKQAKLDKANILSDATRMLAQLR
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si018232m.g
Setaria italica
Si018232m.g
N
0.903
Pavir.Ab00172
Panicum virgatum
Pavir.Ab00172
N
0.903
Pavir.Ab02693
Panicum virgatum
Pavir.Ab02693
N
0.902
OPUNC02G00650
Oryza punctata
OPUNC02G00650
N
0.901
ONIVA02G01100
Oryza nivara
ONIVA02G01100
N
0.901
ORGLA02G0011200
Oryza glaberrima
ORGLA02G0011200
N
0.901
OS02G0116600
Oryza sativa
OS02G0116600
N
0.901
OMERI02G00630
Oryza meridionalis
OMERI02G00630
N
0.901
ORUFI02G01220
Oryza rufipogon
ORUFI02G01220
N
0.901
OLONG_000275
Oryza longistaminata
OLONG_000275
N
0.901
OBART02G01220
Oryza barthii
OBART02G01220
N
0.901
OGLUM02G01100
Oryza glumaepatula
OGLUM02G01100
N
0.901
BGIOSGA007247
Oryza indica
BGIOSGA007247
N
0.901
GSMUA_Achr8G33180_001
Musa acuminata
GSMUA_Achr8G33180_001
I
0.874
LPERR02G01020
Leersia perrieri
LPERR02G01020
N
0.874
GRMZM2G314882
Zea mays
GRMZM2G314882
N
0.868
Sb04g001200
Sorghum bicolor
Sb04g001200
N
0.868
GRMZM5G856837
Zea mays
GRMZM5G856837
N
0.868
GLYMA15G06803
Glycine max
GLYMA15G06803
I
0.861
GLYMA15G06860
Glycine max
GLYMA15G06860
I
0.861