CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba03537
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Ba03537
T050691_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba03537.1.p
bHLH
252
299
LQHMFSERKRREKLNDSFHALKAVLPPGAKKDKTSILIRAREYLRSLQ
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb09g006220
Sorghum bicolor
Sb09g006220
N
0.900
ORGLA01G0058200
Oryza glaberrima
ORGLA01G0058200
N
0.890
ORGLA01G0397100
Oryza glaberrima
ORGLA01G0397100
N
0.890
ONIVA01G07190
Oryza nivara
ONIVA01G07190
N
0.890
ORGLA08G0199700
Oryza glaberrima
ORGLA08G0199700
N
0.890
BGIOSGA002940
Oryza indica
BGIOSGA002940
N
0.890
OMERI01G06310
Oryza meridionalis
OMERI01G06310
N
0.890
OS01G0195801
Oryza sativa
OS01G0195801
N
0.890
Si001328m.g
Setaria italica
Si001328m.g
N
0.890
Pavir.Ea00369
Panicum virgatum
Pavir.Ea00369
N
0.890
Sb03g002910
Sorghum bicolor
Sb03g002910
N
0.890
OS01G0196300
Oryza sativa
OS01G0196300
N
0.890
OGLUM01G06730
Oryza glumaepatula
OGLUM01G06730
N
0.890
ORUFI01G06710
Oryza rufipogon
ORUFI01G06710
N
0.890
ONIVA01G07080
Oryza nivara
ONIVA01G07080
N
0.890
GRMZM2G397755
Zea mays
GRMZM2G397755
N
0.890
BGIOSGA002943
Oryza indica
BGIOSGA002943
N
0.890
OGLUM01G06690
Oryza glumaepatula
OGLUM01G06690
N
0.890
LPERR01G05820
Leersia perrieri
LPERR01G05820
N
0.890
GRMZM2G333582
Zea mays
GRMZM2G333582
N
0.890
OBART01G06170
Oryza barthii
OBART01G06170
N
0.890
OB01G16120
Oryza brachyantha
OB01G16120
N
0.890
OBART01G06120
Oryza barthii
OBART01G06120
N
0.890
GRMZM2G132550
Zea mays
GRMZM2G132550
N
0.876
OPUNC01G05940
Oryza punctata
OPUNC01G05940
N
0.870
TRAES3BF076600020CFD_g
Triticum aestivum
TRAES3BF076600020CFD_g
N
0.869
TRIUR3_35423
Triticum urartu
TRIUR3_35423
N
0.869
TRAES3BF075700010CFD_g
Triticum aestivum
TRAES3BF075700010CFD_g
N
0.869
BRADI2G05950
Brachypodium distachyon
BRADI2G05950
N
0.869
MLOC_21524
Hordeum vulgare
MLOC_21524
N
0.869
F775_21644
Aegilops tauschii
F775_21644
N
0.869
Traes_3AS_037375C84
Triticum aestivum
Traes_3AS_037375C84
N
0.869
GRMZM2G175480
Zea mays
GRMZM2G175480
N
0.856
Pavir.Eb00279
Panicum virgatum
Pavir.Eb00279
N
0.847