Pavir.Ba03537 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ba03537 T050691_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba03537.1.p bHLH 252 299

Links

Other bHLH family TFs
Other Panicum virgatum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sb09g006220 Sorghum bicolor Sb09g006220 N 0.900
ORGLA01G0058200 Oryza glaberrima ORGLA01G0058200 N 0.890
ORGLA01G0397100 Oryza glaberrima ORGLA01G0397100 N 0.890
ONIVA01G07190 Oryza nivara ONIVA01G07190 N 0.890
ORGLA08G0199700 Oryza glaberrima ORGLA08G0199700 N 0.890
BGIOSGA002940 Oryza indica BGIOSGA002940 N 0.890
OMERI01G06310 Oryza meridionalis OMERI01G06310 N 0.890
OS01G0195801 Oryza sativa OS01G0195801 N 0.890
Si001328m.g Setaria italica Si001328m.g N 0.890
Pavir.Ea00369 Panicum virgatum Pavir.Ea00369 N 0.890
Sb03g002910 Sorghum bicolor Sb03g002910 N 0.890
OS01G0196300 Oryza sativa OS01G0196300 N 0.890
OGLUM01G06730 Oryza glumaepatula OGLUM01G06730 N 0.890
ORUFI01G06710 Oryza rufipogon ORUFI01G06710 N 0.890
ONIVA01G07080 Oryza nivara ONIVA01G07080 N 0.890
GRMZM2G397755 Zea mays GRMZM2G397755 N 0.890
BGIOSGA002943 Oryza indica BGIOSGA002943 N 0.890
OGLUM01G06690 Oryza glumaepatula OGLUM01G06690 N 0.890
LPERR01G05820 Leersia perrieri LPERR01G05820 N 0.890
GRMZM2G333582 Zea mays GRMZM2G333582 N 0.890
OBART01G06170 Oryza barthii OBART01G06170 N 0.890
OB01G16120 Oryza brachyantha OB01G16120 N 0.890
OBART01G06120 Oryza barthii OBART01G06120 N 0.890
GRMZM2G132550 Zea mays GRMZM2G132550 N 0.876
OPUNC01G05940 Oryza punctata OPUNC01G05940 N 0.870
TRAES3BF076600020CFD_g Triticum aestivum TRAES3BF076600020CFD_g N 0.869
TRIUR3_35423 Triticum urartu TRIUR3_35423 N 0.869
TRAES3BF075700010CFD_g Triticum aestivum TRAES3BF075700010CFD_g N 0.869
BRADI2G05950 Brachypodium distachyon BRADI2G05950 N 0.869
MLOC_21524 Hordeum vulgare MLOC_21524 N 0.869
F775_21644 Aegilops tauschii F775_21644 N 0.869
Traes_3AS_037375C84 Triticum aestivum Traes_3AS_037375C84 N 0.869
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.856
Pavir.Eb00279 Panicum virgatum Pavir.Eb00279 N 0.847