TF Information

Pavir.Bb03157 *(Panicum virgatum)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	Pavir.Bb03157	T050703_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AT2G42280 M06733_2.00	Arabidopsis thaliana	DNCMACTTGYH	DRCAAGTKGNH	Dap-seq OMalley et al.(2016) bHLH130_col_a	0.867	0.961
BHLH122 M06724_2.00	Arabidopsis thaliana	NNDNCMACTTGNNH	DNNCAAGTKGNHNN	Dap-seq OMalley et al.(2016) bHLH122_col100_a	0.844	0.902
BHLH122 M06725_2.00	Arabidopsis thaliana	DNCMACTTGYN	NRCAAGTKGNH	Dap-seq OMalley et al.(2016) bHLH122_colamp_a	0.844	0.902
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.Bb03157.1.p	bHLH	143	193	ATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ
Pavir.Bb03157.2.p	bHLH	143	193	ATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ

Links
Other bHLH family TFs
Other *Panicum virgatum* TFs

Invalid Input OrderBy

81 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action