Pavir.Ca01239 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ca01239 T050710_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01239.1.p bHLH 182 229

Links

Other bHLH family TFs
Other Panicum virgatum TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J26871 Panicum virgatum Pavir.J26871 I 0.884
Si024086m.g Setaria italica Si024086m.g I 0.884
GRMZM2G036554 Zea mays GRMZM2G036554 I 0.864
ONIVA03G30250 Oryza nivara ONIVA03G30250 I 0.852
OPUNC03G26580 Oryza punctata OPUNC03G26580 I 0.852
ORUFI03G30180 Oryza rufipogon ORUFI03G30180 I 0.852
BGIOSGA013293 Oryza indica BGIOSGA013293 I 0.852
Pavir.J30022 Panicum virgatum Pavir.J30022 I 0.852
OGLUM03G29200 Oryza glumaepatula OGLUM03G29200 I 0.852
mg008709m Mimulus guttatus mg008709m I 0.849
mg004185m Mimulus guttatus mg004185m I 0.849
Eucgr.H02386 Eucalyptus grandis Eucgr.H02386 I 0.846
Cla014287 Citrullus lanatus Cla014287 I 0.843
Cucsa.103620 Cucumis sativus Cucsa.103620 I 0.843
Sb08g022760 Sorghum bicolor Sb08g022760 I 0.841
Si011972m.g Setaria italica Si011972m.g I 0.841
ORGLA12G0170500 Oryza glaberrima ORGLA12G0170500 I 0.841
Sb06g017460 Sorghum bicolor Sb06g017460 I 0.841
Sb01g012260 Sorghum bicolor Sb01g012260 I 0.841
ORUFI12G22050 Oryza rufipogon ORUFI12G22050 I 0.841
Sb01g012250 Sorghum bicolor Sb01g012250 I 0.841
OS12G0632600 Oryza sativa OS12G0632600 I 0.841
Sb01g012280 Sorghum bicolor Sb01g012280 I 0.841
Traes_4DS_6A9EB40A4 Triticum aestivum Traes_4DS_6A9EB40A4 I 0.841
Pavir.Ia01059 Panicum virgatum Pavir.Ia01059 I 0.841
Pavir.Ia01038 Panicum virgatum Pavir.Ia01038 I 0.841
Pavir.Ib04096 Panicum virgatum Pavir.Ib04096 I 0.841
Pavir.Ib04188 Panicum virgatum Pavir.Ib04188 I 0.841
Pavir.Ib04190 Panicum virgatum Pavir.Ib04190 I 0.841
Pavir.Ia01004 Panicum virgatum Pavir.Ia01004 I 0.841
TRIUR3_29908 Triticum urartu TRIUR3_29908 I 0.841
Si038721m.g Setaria italica Si038721m.g I 0.841
Si036185m.g Setaria italica Si036185m.g I 0.841
Si039325m.g Setaria italica Si039325m.g I 0.841
ORGLA03G0269200 Oryza glaberrima ORGLA03G0269200 I 0.841
TRIUR3_05977 Triticum urartu TRIUR3_05977 I 0.841
Si022171m.g Setaria italica Si022171m.g I 0.841
OPUNC12G17950 Oryza punctata OPUNC12G17950 I 0.841
GRMZM2G155043 Zea mays GRMZM2G155043 I 0.841
GRMZM2G095899 Zea mays GRMZM2G095899 I 0.841
GRMZM2G355469 Zea mays GRMZM2G355469 I 0.841
GSMUA_Achr8G26460_001 Musa acuminata GSMUA_Achr8G26460_001 I 0.841
ORGLA03G0268800 Oryza glaberrima ORGLA03G0268800 I 0.841
LPERR03G24050 Leersia perrieri LPERR03G24050 I 0.841
GRMZM2G068604 Zea mays GRMZM2G068604 I 0.841
GRMZM2G049686 Zea mays GRMZM2G049686 I 0.841
BRADI1G12770 Brachypodium distachyon BRADI1G12770 I 0.841
BGIOSGA037855 Oryza indica BGIOSGA037855 I 0.841
BRADI4G00920 Brachypodium distachyon BRADI4G00920 I 0.841
F775_11133 Aegilops tauschii F775_11133 I 0.841
GLYMA01G40611 Glycine max GLYMA01G40611 I 0.841
F775_11635 Aegilops tauschii F775_11635 I 0.841
MLOC_42946 Hordeum vulgare MLOC_42946 I 0.841
LPERR12G16560 Leersia perrieri LPERR12G16560 I 0.841
OMERI03G25360 Oryza meridionalis OMERI03G25360 I 0.841
OLONG_017178 Oryza longistaminata OLONG_017178 I 0.841
OMERI12G15000 Oryza meridionalis OMERI12G15000 I 0.841
ONIVA03G07570 Oryza nivara ONIVA03G07570 I 0.841
BGIOSGA010080 Oryza indica BGIOSGA010080 I 0.841
OPUNC03G26600 Oryza punctata OPUNC03G26600 I 0.841
OGLUM12G21470 Oryza glumaepatula OGLUM12G21470 I 0.841
OLONG_002504 Oryza longistaminata OLONG_002504 I 0.841
OBART03G29020 Oryza barthii OBART03G29020 I 0.841
OB03G36530 Oryza brachyantha OB03G36530 I 0.841
OBART12G19700 Oryza barthii OBART12G19700 I 0.841
OGLUM03G29270 Oryza glumaepatula OGLUM03G29270 I 0.841
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.840
TRIUR3_13152 Triticum urartu TRIUR3_13152 I 0.840
Si011709m.g Setaria italica Si011709m.g I 0.840
F775_12608 Aegilops tauschii F775_12608 I 0.840
MTR_5g014600 Medicago truncatula MTR_5g014600 I 0.839