Pavir.Gb01093 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Gb01093 T050797_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb01093.1.p bHLH 332 379

Links

Other bHLH family TFs
Other Panicum virgatum TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.893
Si000845m.g Setaria italica Si000845m.g I 0.880
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.880
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.880
Si012401m.g Setaria italica Si012401m.g I 0.880
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.880
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.880
GRMZM5G822829 Zea mays GRMZM5G822829 N 0.878
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.878
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.877
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.856
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.856
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.856
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.856
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.856
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.856
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.856
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.856
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.856
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.856
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.856
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.856
OS04G0557200 Oryza sativa OS04G0557200 N 0.856
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.856
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.856
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.856
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.856
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.856
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.856
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.856
OB04G28350 Oryza brachyantha OB04G28350 N 0.856
F775_10624 Aegilops tauschii F775_10624 N 0.856
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.856
OBART04G21370 Oryza barthii OBART04G21370 N 0.856
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.856
OB04G28380 Oryza brachyantha OB04G28380 N 0.856
OBART04G21320 Oryza barthii OBART04G21320 N 0.856
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.856
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.856
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.856
OB04G28390 Oryza brachyantha OB04G28390 N 0.856
OBART01G20350 Oryza barthii OBART01G20350 N 0.856
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.854
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.854
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.854
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.854
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.854
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.854
OB01G30110 Oryza brachyantha OB01G30110 N 0.854
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.854
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.854
TCM_037645 Theobroma cacao TCM_037645 I 0.851
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I 0.851
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.851
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.851
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I 0.851
Sb06g025020 Sorghum bicolor Sb06g025020 N 0.851
OS04G0557800 Oryza sativa OS04G0557800 N 0.844
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.843
LPERR04G17390 Leersia perrieri LPERR04G17390 N 0.843
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.843
F775_18830 Aegilops tauschii F775_18830 N 0.843
F775_19744 Aegilops tauschii F775_19744 N 0.843
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.841
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.838