Pavir.Ia04450 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ia04450 T050830_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04450.1.p bHLH 166 213

Links

Other bHLH family TFs
Other Panicum virgatum TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29610.m000410 Ricinus communis 29610.m000410 I 0.000
AT3G11280 Arabidopsis thaliana AT3G11280 D 0.000
Bo1g141120 Brassica oleracea Bo1g141120 I 0.000
Bostr.19424s1061 Boechera stricta Bostr.19424s1061 I 0.000
Bra034173 Brassica rapa Bra034173 I 0.000
Bra034853 Brassica rapa Bra034853 I 0.000
Cagra.1655s0043 Capsella grandiflora Cagra.1655s0043 I 0.000
Carubv10014411m.g Capsella rubella Carubv10014411m.g I 0.000
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.000
Ca_12513 Cicer arietinum Ca_12513 I 0.000
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I 0.000
Cla004397 Citrullus lanatus Cla004397 I 0.000
Cla013553 Citrullus lanatus Cla013553 I 0.000
evm.TU.supercontig_19.216 Carica papaya evm.TU.supercontig_19.216 I 0.000
fgenesh2_kg.3__1170__AT3G11280.1 Arabidopsis lyrata fgenesh2_kg.3__1170__AT3G11280.1 I 0.000
GLYMA02G42140 Glycine max GLYMA02G42140 I 0.000
GLYMA11G34930 Glycine max GLYMA11G34930 I 0.000
GLYMA14G06750 Glycine max GLYMA14G06750 I 0.000
GLYMA18G03430 Glycine max GLYMA18G03430 I 0.000
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.000
Lus10009884.g Linum usitatissimum Lus10009884.g I 0.000
Lus10014837.g Linum usitatissimum Lus10014837.g I 0.000
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.000
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I 0.000
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.000
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.000
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I 0.000
TCM_042604 Theobroma cacao TCM_042604 I 0.000
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I 0.000