Pavir.Ia04450 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ia04450 T050830_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04450.1.p bHLH 166 213

Links

Other bHLH family TFs
Other Panicum virgatum TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28179.m000457 Ricinus communis 28179.m000457 N 0.890
29596.m000688 Ricinus communis 29596.m000688 N 0.890
Aquca_010_00033 Aquilegia coerulea Aquca_010_00033 N 0.860
BGIOSGA011499 Oryza indica BGIOSGA011499 N 0.914
BGIOSGA023624 Oryza indica BGIOSGA023624 N 0.890
BGIOSGA031474 Oryza indica BGIOSGA031474 N 0.860
bHLH093 Arabidopsis lyrata fgenesh2_kg.8__2611__AT5G65640.1 N 0.890
BHLH61 Arabidopsis thaliana AT5G10570 N 0.890
BHLH93 Arabidopsis thaliana AT5G65640 N 0.890
Bo2g168250 Brassica oleracea Bo2g168250 N 0.860
Bo3g097890 Brassica oleracea Bo3g097890 N 0.890
Bo9g171940 Brassica oleracea Bo9g171940 N 0.890
Bostr.0568s0223 Boechera stricta Bostr.0568s0223 N 0.890
Bostr.13175s0042 Boechera stricta Bostr.13175s0042 N 0.890
Bra024404 Brassica rapa Bra024404 N 0.890
Bra031852 Brassica rapa Bra031852 N 0.860
BRADI1G30000 Brachypodium distachyon BRADI1G30000 N 0.890
BRADI1G76030 Brachypodium distachyon BRADI1G76030 N 0.884
Cagra.0917s0023 Capsella grandiflora Cagra.0917s0023 N 0.890
Cagra.1085s0002 Capsella grandiflora Cagra.1085s0002 N 0.864
Carubv10001486m.g Capsella rubella Carubv10001486m.g N 0.864
Carubv10026606m.g Capsella rubella Carubv10026606m.g N 0.890
cassava1707.valid.m1 Manihot esculenta cassava1707.valid.m1 N 0.890
cassava20174.m1 Manihot esculenta cassava20174.m1 N 0.890
cassava35909.valid.m1 Manihot esculenta cassava35909.valid.m1 N 0.890
cassava42105.valid.m1 Manihot esculenta cassava42105.valid.m1 N 0.890
Ca_04981 Cicer arietinum Ca_04981 N 0.864
Ca_11531 Cicer arietinum Ca_11531 N 0.890
chr2.CM0177.460.nc Lotus japonicus chr2.CM0177.460.nc N 0.890
chr2.CM0504.20.nd Lotus japonicus chr2.CM0504.20.nd N 0.864
Ciclev10001683m.g Citrus clementina Ciclev10001683m.g N 0.890
Ciclev10025967m.g Citrus clementina Ciclev10025967m.g N 0.890
Cla014300 Citrullus lanatus Cla014300 N 0.890
Cla022518 Citrullus lanatus Cla022518 N 0.864
Cla023435 Citrullus lanatus Cla023435 N 0.864
Cucsa.103760 Cucumis sativus Cucsa.103760 N 0.890
Cucsa.160860 Cucumis sativus Cucsa.160860 N 0.864
Cucsa.312190 Cucumis sativus Cucsa.312190 N 0.864
Eucgr.F00459 Eucalyptus grandis Eucgr.F00459 N 0.890
Eucgr.F02171 Eucalyptus grandis Eucgr.F02171 N 0.890
Eucgr.I00608 Eucalyptus grandis Eucgr.I00608 N 0.890
evm.TU.supercontig_129.19 Carica papaya evm.TU.supercontig_129.19 N 0.890
evm.TU.supercontig_177.1 Carica papaya evm.TU.supercontig_177.1 N 0.860
F775_00539 Aegilops tauschii F775_00539 N 0.912
fgenesh2_kg.6__1024__AT5G10570.1 Arabidopsis lyrata fgenesh2_kg.6__1024__AT5G10570.1 N 0.890
gene05560-v1.0-hybrid Fragaria vesca gene05560-v1.0-hybrid N 0.890
gene26895-v1.0-hybrid Fragaria vesca gene26895-v1.0-hybrid N 0.890
GLYMA01G02390 Glycine max GLYMA01G02390 N 0.890
GLYMA02G38240 Glycine max GLYMA02G38240 N 0.864
GLYMA04G09580 Glycine max GLYMA04G09580 N 0.890
GLYMA06G09670 Glycine max GLYMA06G09670 N 0.890
GLYMA08G37240 Glycine max GLYMA08G37240 N 0.890
GLYMA09G33590 Glycine max GLYMA09G33590 N 0.890
GLYMA14G36370 Glycine max GLYMA14G36370 N 0.864
Gorai.002G137900 Gossypium raimondii Gorai.002G137900 N 0.890
Gorai.003G035900 Gossypium raimondii Gorai.003G035900 N 0.890
Gorai.007G229900 Gossypium raimondii Gorai.007G229900 N 0.890
Gorai.009G226200 Gossypium raimondii Gorai.009G226200 N 0.890
Gorai.010G031800 Gossypium raimondii Gorai.010G031800 N 0.890
GRMZM2G128807 Zea mays GRMZM2G128807 N 0.890
GRMZM2G173372 Zea mays GRMZM2G173372 N 0.914
GRMZM2G435015 Zea mays GRMZM2G435015 N 0.870
GSMUA_Achr1G26300_001 Musa acuminata GSMUA_Achr1G26300_001 N 0.890
GSMUA_Achr7G03930_001 Musa acuminata GSMUA_Achr7G03930_001 N 0.890
GSMUA_Achr8G34120_001 Musa acuminata GSMUA_Achr8G34120_001 N 0.890
GSMUA_AchrUn_randomG16890_001 Musa acuminata GSMUA_AchrUn_randomG16890_001 N 0.890
LjSGA_043777.1 Lotus japonicus LjSGA_043777.1 N 0.890
LPERR03G02580 Leersia perrieri LPERR03G02580 N 0.914
LPERR06G23280 Leersia perrieri LPERR06G23280 N 0.890
Lus10002160.g Linum usitatissimum Lus10002160.g N 0.890
Lus10039631.g Linum usitatissimum Lus10039631.g N 0.890
MDP0000175282 Malus domestica MDP0000175282 N 0.890
MDP0000178782 Malus domestica MDP0000178782 N 0.890
MDP0000312274 Malus domestica MDP0000312274 N 0.890
MDP0000603926 Malus domestica MDP0000603926 N 0.890
MDP0000644807 Malus domestica MDP0000644807 N 0.890
mgf011848m Mimulus guttatus mgf011848m N 0.890
mgf017272m Mimulus guttatus mgf017272m N 0.890
MLOC_55768 Hordeum vulgare MLOC_55768 N 0.914
MTR_3g111290 Medicago truncatula MTR_3g111290 N 0.864
MTR_5g030770 Medicago truncatula MTR_5g030770 N 0.890
OB03G12820 Oryza brachyantha OB03G12820 N 0.914
OBART03G02840 Oryza barthii OBART03G02840 N 0.914
OBART06G27800 Oryza barthii OBART06G27800 N 0.890
OBART06G27860 Oryza barthii OBART06G27860 N 0.890
OBART10G17440 Oryza barthii OBART10G17440 N 0.860
OGLUM03G02750 Oryza glumaepatula OGLUM03G02750 N 0.914
OGLUM06G29220 Oryza glumaepatula OGLUM06G29220 N 0.890
OGLUM10G17470 Oryza glumaepatula OGLUM10G17470 N 0.860
OLONG_005983 Oryza longistaminata OLONG_005983 N 0.914
OMERI03G02800 Oryza meridionalis OMERI03G02800 N 0.914
OMERI06G27810 Oryza meridionalis OMERI06G27810 N 0.890
OMERI10G13920 Oryza meridionalis OMERI10G13920 N 0.860
ONIVA03G02430 Oryza nivara ONIVA03G02430 N 0.914
ONIVA06G30800 Oryza nivara ONIVA06G30800 N 0.890
ONIVA10G19680 Oryza nivara ONIVA10G19680 N 0.860
OPUNC03G02570 Oryza punctata OPUNC03G02570 N 0.914
OPUNC06G25390 Oryza punctata OPUNC06G25390 N 0.890
OPUNC10G15730 Oryza punctata OPUNC10G15730 N 0.860
orange1.1g018897m.g Citrus sinensis orange1.1g018897m.g N 0.890
orange1.1g038389m.g Citrus sinensis orange1.1g038389m.g N 0.890
ORGLA03G0026100 Oryza glaberrima ORGLA03G0026100 N 0.914
ORGLA10G0124500 Oryza glaberrima ORGLA10G0124500 N 0.860
ORUFI03G02540 Oryza rufipogon ORUFI03G02540 N 0.914
ORUFI06G29810 Oryza rufipogon ORUFI06G29810 N 0.890
ORUFI10G18500 Oryza rufipogon ORUFI10G18500 N 0.860
OS03G0135700 Oryza sativa OS03G0135700 N 0.914
OS10G0544200 Oryza sativa OS10G0544200 N 0.860
Pavir.Ib00206 Panicum virgatum Pavir.Ib00206 N 0.914
Pavir.J18000 Panicum virgatum Pavir.J18000 N 0.890
Pavir.J18595 Panicum virgatum Pavir.J18595 N 0.890
Pavir.J25463 Panicum virgatum Pavir.J25463 N 0.914
PDK_20s1771821g001 Phoenix dactylifera PDK_20s1771821g001 N 0.890
PGSC0003DMG400002056 Solanum tuberosum PGSC0003DMG400002056 N 0.870
PGSC0003DMG400006394 Solanum tuberosum PGSC0003DMG400006394 N 0.890
PGSC0003DMG400010388 Solanum tuberosum PGSC0003DMG400010388 N 0.890
PGSC0003DMG400030616 Solanum tuberosum PGSC0003DMG400030616 N 0.890
PK12634.1 Cannabis sativa PK12634.1 N 0.890
Pm002283 Prunus mume Pm002283 N 0.890
Pm004330 Prunus mume Pm004330 N 0.890
POPTR_0002s10910 Populus trichocarpa POPTR_0002s10910 N 0.890
PRUPE_ppa007656mg Prunus persica PRUPE_ppa007656mg N 0.890
PRUPE_ppa016514mg Prunus persica PRUPE_ppa016514mg N 0.890
SapurV1A.0004s0900 Salix purpurea SapurV1A.0004s0900 N 0.890
Sb01g047940 Sorghum bicolor Sb01g047940 N 0.914
Sb10g030470 Sorghum bicolor Sb10g030470 N 0.890
SELMODRAFT_77288 Selaginella moellendorffii SELMODRAFT_77288 N 0.855
Si006877m.g Setaria italica Si006877m.g N 0.890
Si036470m.g Setaria italica Si036470m.g N 0.914
Solyc02g063430.2 Solanum lycopersicum Solyc02g063430.2 N 0.890
Solyc02g091690.2 Solanum lycopersicum Solyc02g091690.2 N 0.890
Solyc12g088130.1 Solanum lycopersicum Solyc12g088130.1 N 0.870
TCM_000915 Theobroma cacao TCM_000915 N 0.890
TCM_034574 Theobroma cacao TCM_034574 N 0.890
Thhalv10004732m.g Eutrema salsugineum Thhalv10004732m.g N 0.890
Traes_3AS_1FD49785C Triticum aestivum Traes_3AS_1FD49785C N 0.875
Traes_4BL_0F2281616 Triticum aestivum Traes_4BL_0F2281616 N 0.847
Traes_4DL_0075CCAD9 Triticum aestivum Traes_4DL_0075CCAD9 N 0.914
Traes_4DL_1C0F38900 Triticum aestivum Traes_4DL_1C0F38900 N 0.914
Traes_4DL_5851FBD0C Triticum aestivum Traes_4DL_5851FBD0C N 0.914
Traes_4DL_ACF3BE9C5 Triticum aestivum Traes_4DL_ACF3BE9C5 N 0.912
Traes_7DL_67FF12B6A Triticum aestivum Traes_7DL_67FF12B6A N 0.890
TRIUR3_23651 Triticum urartu TRIUR3_23651 N 0.888
TRIUR3_29035 Triticum urartu TRIUR3_29035 N 0.914
VIT_00s1312g00010 Vitis vinifera VIT_00s1312g00010 N 0.890
VIT_17s0000g03550 Vitis vinifera VIT_17s0000g03550 N 0.890
VIT_18s0001g08040 Vitis vinifera VIT_18s0001g08040 N 0.890