Pavir.J06869 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J06869 T050872_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J06869.1.p bHLH 60 105

Links

Other bHLH family TFs
Other Panicum virgatum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LjSGA_012662.1 Lotus japonicus LjSGA_012662.1 N 0.893
mg005373m Mimulus guttatus mg005373m N 0.849
Cucsa.130030 Cucumis sativus Cucsa.130030 N 0.893
cassava41569.m1 Manihot esculenta cassava41569.m1 N 0.893
Pm002868 Prunus mume Pm002868 N 0.893
Cla018363 Citrullus lanatus Cla018363 N 0.893
Ca_09396 Cicer arietinum Ca_09396 N 0.893
VIT_08s0058g00110 Vitis vinifera VIT_08s0058g00110 N 0.893
TRAES3BF030600030CFD_g Triticum aestivum TRAES3BF030600030CFD_g N 0.914
TRAES3BF030500010CFD_g Triticum aestivum TRAES3BF030500010CFD_g N 0.914
Traes_3B_D6EA106A51 Triticum aestivum Traes_3B_D6EA106A51 N 0.914
TCM_021641 Theobroma cacao TCM_021641 N 0.893
Solyc09g005070.1 Solanum lycopersicum Solyc09g005070.1 N 0.866
Aquca_045_00179 Aquilegia coerulea Aquca_045_00179 N 0.893
Bostr.6251s0101 Boechera stricta Bostr.6251s0101 N 0.893
Thhalv10012562m.g Eutrema salsugineum Thhalv10012562m.g N 0.893
SapurV1A.0905s0090 Salix purpurea SapurV1A.0905s0090 N 0.893
SapurV1A.0001s0420 Salix purpurea SapurV1A.0001s0420 N 0.893
Pavir.Ea03297 Panicum virgatum Pavir.Ea03297 N 0.914
MDP0000436338 Malus domestica MDP0000436338 N 0.880
MDP0000178778 Malus domestica MDP0000178778 N 0.880
Lus10003386.g Linum usitatissimum Lus10003386.g N 0.914
Lus10002213.g Linum usitatissimum Lus10002213.g N 0.888
Gorai.012G117300 Gossypium raimondii Gorai.012G117300 N 0.893
gene13480-v1.0-hybrid Fragaria vesca gene13480-v1.0-hybrid N 0.873
evm.TU.supercontig_120.27 Carica papaya evm.TU.supercontig_120.27 N 0.893
Cagra.4082s0011 Capsella grandiflora Cagra.4082s0011 N 0.893
Si004520m.g Setaria italica Si004520m.g N 0.914
Sb03g038820 Sorghum bicolor Sb03g038820 N 0.914
LPERR01G31030 Leersia perrieri LPERR01G31030 N 0.914
GSMUA_Achr4G18820_001 Musa acuminata GSMUA_Achr4G18820_001 N 0.893
GRMZM2G397518 Zea mays GRMZM2G397518 N 0.914
GLYMA07G18651 Glycine max GLYMA07G18651 N 0.869
GLYMA0732S00200 Glycine max GLYMA0732S00200 N 0.893
GLYMA03G06792 Glycine max GLYMA03G06792 N 0.893
GLYMA01G30660 Glycine max GLYMA01G30660 N 0.893
APTX Arabidopsis lyrata fgenesh2_kg.6__80__AT5G01310.1 N 0.873
BRADI2G54030 Brachypodium distachyon BRADI2G54030 N 0.914
Bra028895 Brassica rapa Bra028895 N 0.868
Bo2g001330 Brassica oleracea Bo2g001330 N 0.868
BGIOSGA004736 Oryza indica BGIOSGA004736 N 0.902
MLOC_54157 Hordeum vulgare MLOC_54157 N 0.914
MTR_7g069590 Medicago truncatula MTR_7g069590 N 0.878
PRUPE_ppa025490mg Prunus persica PRUPE_ppa025490mg N 0.893
POPTR_0016s12830 Populus trichocarpa POPTR_0016s12830 N 0.893
POPTR_0006s10350 Populus trichocarpa POPTR_0006s10350 N 0.893
LAX Oryza sativa OS01G0831000 N 0.914
ORUFI01G39410 Oryza rufipogon ORUFI01G39410 N 0.914
ORGLA06G0253200 Oryza glaberrima ORGLA06G0253200 N 0.914
ORGLA01G0299600 Oryza glaberrima ORGLA01G0299600 N 0.914
OPUNC01G34850 Oryza punctata OPUNC01G34850 N 0.914
ONIVA01G41030 Oryza nivara ONIVA01G41030 N 0.914
OMERI01G33130 Oryza meridionalis OMERI01G33130 N 0.914
OGLUM01G39950 Oryza glumaepatula OGLUM01G39950 N 0.914
OBART01G36050 Oryza barthii OBART01G36050 N 0.914
AT5G01305 Arabidopsis thaliana AT5G01305 N 0.893