Pavir.J18808 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J18808 T050900_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J18808.1.p bHLH 110 157

Links

Other bHLH family TFs
Other Panicum virgatum TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MLOC_44850 Hordeum vulgare MLOC_44850 N 0.914
Pavir.Ga02257 Panicum virgatum Pavir.Ga02257 N 0.914
Traes_2BL_070D9E2AD Triticum aestivum Traes_2BL_070D9E2AD N 0.914
Si010685m.g Setaria italica Si010685m.g N 0.914
Pavir.Gb02374 Panicum virgatum Pavir.Gb02374 N 0.914
BRADI5G01900 Brachypodium distachyon BRADI5G01900 N 0.914
Traes_2DL_8BE259F4B Triticum aestivum Traes_2DL_8BE259F4B N 0.914
F775_11333 Aegilops tauschii F775_11333 N 0.914
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.887
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.879
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.879
Traes_5AL_331CE753D Triticum aestivum Traes_5AL_331CE753D N 0.879
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.879
Traes_4DL_55503B3CD Triticum aestivum Traes_4DL_55503B3CD N 0.879
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.879
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.879
Si010413m.g Setaria italica Si010413m.g N 0.879
TRIUR3_16896 Triticum urartu TRIUR3_16896 N 0.879
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.879
Si010812m.g Setaria italica Si010812m.g N 0.879
OS04G0301500 Oryza sativa OS04G0301500 N 0.879
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.879
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.879
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.879
F775_04545 Aegilops tauschii F775_04545 N 0.879
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.879
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.879
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.879
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.879
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.879
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.878
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.876
PDK_20s1308051g001 Phoenix dactylifera PDK_20s1308051g001 N 0.875
LPERR04G04510 Leersia perrieri LPERR04G04510 N 0.870
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.866
MLOC_43888 Hordeum vulgare MLOC_43888 N 0.865
Traes_5AL_EDF2DD187 Triticum aestivum Traes_5AL_EDF2DD187 N 0.864
POPTR_0006s07440 Populus trichocarpa POPTR_0006s07440 N 0.863
ORGLA04G0051300 Oryza glaberrima ORGLA04G0051300 N 0.860
OMERI03G04040 Oryza meridionalis OMERI03G04040 N 0.860
OPUNC04G05620 Oryza punctata OPUNC04G05620 N 0.860
ORUFI04G07840 Oryza rufipogon ORUFI04G07840 N 0.860
OS04G0300600 Oryza sativa OS04G0300600 N 0.860
OGLUM04G06590 Oryza glumaepatula OGLUM04G06590 N 0.860
OBART04G06800 Oryza barthii OBART04G06800 N 0.860
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.859
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.856
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.855
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.855
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N 0.855
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.855
Cla019147 Citrullus lanatus Cla019147 N 0.852
Si019518m.g Setaria italica Si019518m.g I 0.852
Cucsa.282100 Cucumis sativus Cucsa.282100 N 0.852
mgf019723m Mimulus guttatus mgf019723m I 0.852
gene00631-v1.0-hybrid Fragaria vesca gene00631-v1.0-hybrid N 0.844
MLOC_13653 Hordeum vulgare MLOC_13653 N 0.841
Pm020879 Prunus mume Pm020879 I 0.839
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.839
Ca_14482 Cicer arietinum Ca_14482 N 0.839