Pavir.J19529 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J19529 T050901_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J19529.1.p bHLH 114 158

Links

Other bHLH family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29814.m000736 Ricinus communis 29814.m000736 I 0.000
29970.m000987 Ricinus communis 29970.m000987 I 0.000
30170.m013698 Ricinus communis 30170.m013698 I 0.000
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.000
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.000
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.000
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.000
BGIOSGA000003 Oryza indica BGIOSGA000003 N 0.000
BGIOSGA018238 Oryza indica BGIOSGA018238 I 0.000
Bo1g004900 Brassica oleracea Bo1g004900 I 0.000
Bo3g153550 Brassica oleracea Bo3g153550 I 0.000
Bo4g151410 Brassica oleracea Bo4g151410 I 0.000
Bo7g118450 Brassica oleracea Bo7g118450 I 0.000
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.000
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.000
Bra010593 Brassica rapa Bra010593 I 0.000
Bra011749 Brassica rapa Bra011749 I 0.000
Bra032176 Brassica rapa Bra032176 I 0.000
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.000
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.000
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.000
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.000
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.000
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.000
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.000
Ca_02182 Cicer arietinum Ca_02182 I 0.000
Ca_12468 Cicer arietinum Ca_12468 I 0.000
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.000
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.000
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.000
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.000
Cla004431 Citrullus lanatus Cla004431 I 0.000
Cla020946 Citrullus lanatus Cla020946 I 0.000
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.000
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.000
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.000
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.000
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.000
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.000
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.000
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.000
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.000
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.000
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.000
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.000
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.000
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.000
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.000
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.000
GRMZM2G369799 Zea mays GRMZM2G369799 I 0.000
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.000
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.000
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.000
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.000
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.000
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.000
LPERR01G40230 Leersia perrieri LPERR01G40230 I 0.000
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.000
Lus10010055.g Linum usitatissimum Lus10010055.g I 0.000
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.000
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.000
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.000
MDP0000196986 Malus domestica MDP0000196986 I 0.000
MDP0000232454 Malus domestica MDP0000232454 I 0.000
MDP0000275800 Malus domestica MDP0000275800 I 0.000
MDP0000298689 Malus domestica MDP0000298689 I 0.000
MDP0000463846 Malus domestica MDP0000463846 I 0.000
mgf020432m Mimulus guttatus mgf020432m I 0.000
mgf023922m Mimulus guttatus mgf023922m I 0.000
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.000
MYB73 Arabidopsis thaliana AT4G37260 D 0.000
OB01G55080 Oryza brachyantha OB01G55080 N 0.000
OBART01G45880 Oryza barthii OBART01G45880 N 0.000
OGLUM01G50230 Oryza glumaepatula OGLUM01G50230 N 0.000
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I 0.000
OLONG_011153 Oryza longistaminata OLONG_011153 N 0.000
OMERI05G11510 Oryza meridionalis OMERI05G11510 I 0.000
ONIVA01G52120 Oryza nivara ONIVA01G52120 N 0.000
ONIVA05G13470 Oryza nivara ONIVA05G13470 I 0.000
OPUNC01G44800 Oryza punctata OPUNC01G44800 N 0.000
OPUNC05G11020 Oryza punctata OPUNC05G11020 I 0.000
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.000
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.000
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.000
ORGLA01G0396300 Oryza glaberrima ORGLA01G0396300 N 0.000
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I 0.000
ORUFI01G49370 Oryza rufipogon ORUFI01G49370 N 0.000
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I 0.000
OS01G0977300 Oryza sativa OS01G0977300 N 0.000
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I 0.000
Pavir.J33236 Panicum virgatum Pavir.J33236 I 0.000
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.000
PK01153.1 Cannabis sativa PK01153.1 I 0.000
PK17282.1 Cannabis sativa PK17282.1 I 0.000
Pm005332 Prunus mume Pm005332 I 0.000
Pm018951 Prunus mume Pm018951 I 0.000
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.000
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.000
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.000
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.000
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.000
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.000
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.000
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.000
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.000
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.000
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.000
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.000
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.000
Sb0088s002210 Sorghum bicolor Sb0088s002210 N 0.000
Si022959m.g Setaria italica Si022959m.g I 0.000
Si024344m.g Setaria italica Si024344m.g I 0.000
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.000
TCM_000696 Theobroma cacao TCM_000696 I 0.000
TCM_007138 Theobroma cacao TCM_007138 I 0.000
TCM_042474 Theobroma cacao TCM_042474 I 0.000
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.000
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.000
Traes_4AS_A79A68739 Triticum aestivum Traes_4AS_A79A68739 N 0.000
Traes_4BL_545A5716E Triticum aestivum Traes_4BL_545A5716E I 0.000
Traes_4DL_D41CB81EA Triticum aestivum Traes_4DL_D41CB81EA I 0.000
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.000
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.000