Pavir.J21430 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J21430 T050905_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J21430.1.p bHLH 211 256

Links

Other bHLH family TFs
Other Panicum virgatum TFs

314 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28179.m000478 Ricinus communis 28179.m000478 I 0.000
28179.m000479 Ricinus communis 28179.m000479 I 0.000
29804.m001498 Ricinus communis 29804.m001498 I 0.000
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.000
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.000
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.000
BGIOSGA010080 Oryza indica BGIOSGA010080 I 0.000
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.000
BGIOSGA037855 Oryza indica BGIOSGA037855 I 0.000
Bo4g150960 Brassica oleracea Bo4g150960 I 0.000
Bra030210 Brassica rapa Bra030210 I 0.000
Bra039924 Brassica rapa Bra039924 I 0.000
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.000
BRADI1G12770 Brachypodium distachyon BRADI1G12770 I 0.000
BRADI4G00920 Brachypodium distachyon BRADI4G00920 I 0.000
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.000
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.000
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.000
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.000
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.000
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.000
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.000
Ca_05320 Cicer arietinum Ca_05320 I 0.000
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.000
chr2.CM0021.440.nc Lotus japonicus chr2.CM0021.440.nc I 0.000
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.000
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.000
Cla000123 Citrullus lanatus Cla000123 I 0.000
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.000
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I 0.000
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I 0.000
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.000
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.000
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.000
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.000
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.000
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.000
F775_11371 Aegilops tauschii F775_11371 I 0.000
F775_11635 Aegilops tauschii F775_11635 I 0.000
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.000
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.000
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.000
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.000
GLYMA05G23530 Glycine max GLYMA05G23530 I 0.000
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.000
GLYMA17G16720 Glycine max GLYMA17G16720 I 0.000
GLYMA17G16741 Glycine max GLYMA17G16741 I 0.000
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.000
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.000
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.000
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I 0.000
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.000
GRMZM2G036554 Zea mays GRMZM2G036554 I 0.000
GRMZM2G049686 Zea mays GRMZM2G049686 I 0.000
GRMZM2G068604 Zea mays GRMZM2G068604 I 0.000
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.000
GRMZM2G120021 Zea mays GRMZM2G120021 I 0.000
GRMZM2G155043 Zea mays GRMZM2G155043 I 0.000
GRMZM2G355469 Zea mays GRMZM2G355469 I 0.000
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.000
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I 0.000
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I 0.000
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I 0.000
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.000
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.000
LPERR03G24050 Leersia perrieri LPERR03G24050 I 0.000
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.000
LPERR12G16560 Leersia perrieri LPERR12G16560 I 0.000
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.000
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.000
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.000
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.000
MDP0000159571 Malus domestica MDP0000159571 I 0.000
MDP0000170202 Malus domestica MDP0000170202 I 0.000
MDP0000174149 Malus domestica MDP0000174149 I 0.000
MDP0000291132 Malus domestica MDP0000291132 I 0.000
MDP0000318216 Malus domestica MDP0000318216 I 0.000
MDP0000502440 Malus domestica MDP0000502440 I 0.000
MLOC_42946 Hordeum vulgare MLOC_42946 I 0.000
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.000
MTR_4g097920 Medicago truncatula MTR_4g097920 I 0.000
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.000
OB03G36530 Oryza brachyantha OB03G36530 I 0.000
OBART03G32580 Oryza barthii OBART03G32580 I 0.000
OBART12G19700 Oryza barthii OBART12G19700 I 0.000
OGLUM03G29270 Oryza glumaepatula OGLUM03G29270 I 0.000
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.000
OGLUM12G21470 Oryza glumaepatula OGLUM12G21470 I 0.000
OLONG_002504 Oryza longistaminata OLONG_002504 I 0.000
OLONG_017178 Oryza longistaminata OLONG_017178 I 0.000
OMERI03G25360 Oryza meridionalis OMERI03G25360 I 0.000
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.000
OMERI12G15000 Oryza meridionalis OMERI12G15000 I 0.000
ONIVA03G07570 Oryza nivara ONIVA03G07570 I 0.000
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.000
OPUNC03G26600 Oryza punctata OPUNC03G26600 I 0.000
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.000
OPUNC12G17950 Oryza punctata OPUNC12G17950 I 0.000
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.000
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.000
ORGLA03G0269200 Oryza glaberrima ORGLA03G0269200 I 0.000
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.000
ORGLA12G0170500 Oryza glaberrima ORGLA12G0170500 I 0.000
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.000
ORUFI12G22050 Oryza rufipogon ORUFI12G22050 I 0.000
OS03G0725800 Oryza sativa OS03G0725800 I 0.000
OS12G0632600 Oryza sativa OS12G0632600 I 0.000
Pavir.Ia01004 Panicum virgatum Pavir.Ia01004 I 0.000
Pavir.Ia01038 Panicum virgatum Pavir.Ia01038 I 0.000
Pavir.Ia01059 Panicum virgatum Pavir.Ia01059 I 0.000
Pavir.Ib04096 Panicum virgatum Pavir.Ib04096 I 0.000
Pavir.Ib04188 Panicum virgatum Pavir.Ib04188 I 0.000
Pavir.Ib04190 Panicum virgatum Pavir.Ib04190 I 0.000
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.000
Pavir.J26871 Panicum virgatum Pavir.J26871 I 0.000
Pavir.J30022 Panicum virgatum Pavir.J30022 I 0.000
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.000
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.000
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.000
PGSC0003DMG400005525 Solanum tuberosum PGSC0003DMG400005525 I 0.000
PGSC0003DMG401010822 Solanum tuberosum PGSC0003DMG401010822 I 0.000
PK09122.1 Cannabis sativa PK09122.1 I 0.000
PK11573.1 Cannabis sativa PK11573.1 I 0.000
Pm002304 Prunus mume Pm002304 I 0.000
Pm002305 Prunus mume Pm002305 I 0.000
Pm021008 Prunus mume Pm021008 I 0.000
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.000
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.000
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.000
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.000
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.000
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.000
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.000
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.000
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.000
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.000
Sb01g012260 Sorghum bicolor Sb01g012260 I 0.000
Sb01g012280 Sorghum bicolor Sb01g012280 I 0.000
Sb06g017460 Sorghum bicolor Sb06g017460 I 0.000
Sb08g022760 Sorghum bicolor Sb08g022760 I 0.000
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.000
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.000
Si011972m.g Setaria italica Si011972m.g I 0.000
Si024086m.g Setaria italica Si024086m.g I 0.000
Si036185m.g Setaria italica Si036185m.g I 0.000
Si036393m.g Setaria italica Si036393m.g I 0.000
Si038721m.g Setaria italica Si038721m.g I 0.000
Si039325m.g Setaria italica Si039325m.g I 0.000
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.000
Solyc10g009270.2 Solanum lycopersicum Solyc10g009270.2 I 0.000
TCM_000895 Theobroma cacao TCM_000895 I 0.000
TCM_006357 Theobroma cacao TCM_006357 I 0.000
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.000
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.000
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.000
Traes_4DS_6A9EB40A4 Triticum aestivum Traes_4DS_6A9EB40A4 I 0.000
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.000
TRIUR3_05977 Triticum urartu TRIUR3_05977 I 0.000
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.000
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.000
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.000