Pavir.J30600 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J30600 T050928_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J30600.1.p bHLH 225 272

Links

Other bHLH family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA006856 Oryza indica BGIOSGA006856 N 0.882
BRADI3G08280 Brachypodium distachyon BRADI3G08280 N 0.890
F775_18168 Aegilops tauschii F775_18168 N 0.903
GRMZM2G170559 Zea mays GRMZM2G170559 N 0.882
GRMZM2G340177 Zea mays GRMZM2G340177 N 0.914
LPERR02G07820 Leersia perrieri LPERR02G07820 N 0.882
OGLUM02G09240 Oryza glumaepatula OGLUM02G09240 N 0.882
OMERI02G10300 Oryza meridionalis OMERI02G10300 N 0.882
ONIVA11G03290 Oryza nivara ONIVA11G03290 N 0.882
OPUNC02G08070 Oryza punctata OPUNC02G08070 N 0.882
OPUNC06G17210 Oryza punctata OPUNC06G17210 N 0.845
ORUFI02G09060 Oryza rufipogon ORUFI02G09060 N 0.882
OS02G0221100 Oryza sativa OS02G0221100 N 0.882
Pavir.J40109 Panicum virgatum Pavir.J40109 N 0.869
Sb04g007795 Sorghum bicolor Sb04g007795 N 0.882
Sb10g022530 Sorghum bicolor Sb10g022530 N 0.914
Si007981m.g Setaria italica Si007981m.g N 0.914
Si019540m.g Setaria italica Si019540m.g N 0.882
Traes_6AS_4D5775944 Triticum aestivum Traes_6AS_4D5775944 N 0.903
TRIUR3_19577 Triticum urartu TRIUR3_19577 N 0.890