Pavir.J35704 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J35704 T050937_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J35704.1.p bHLH 90 141

Links

Other bHLH family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb02g035580 Sorghum bicolor Sb02g035580 N 0.914
OB07G23510 Oryza brachyantha OB07G23510 N 0.914
Si030877m.g Setaria italica Si030877m.g N 0.914
Pavir.Ba00731 Panicum virgatum Pavir.Ba00731 N 0.914
BGIOSGA024146 Oryza indica BGIOSGA024146 N 0.888
OMERI07G14510 Oryza meridionalis OMERI07G14510 N 0.888
OS07G0543000 Oryza sativa OS07G0543000 N 0.888
OLONG_014592 Oryza longistaminata OLONG_014592 N 0.888
ORUFI07G18300 Oryza rufipogon ORUFI07G18300 N 0.888
ONIVA07G15940 Oryza nivara ONIVA07G15940 N 0.888
OBART07G17630 Oryza barthii OBART07G17630 N 0.888
OGLUM07G17270 Oryza glumaepatula OGLUM07G17270 N 0.888
OPUNC07G16420 Oryza punctata OPUNC07G16420 N 0.864
GRMZM2G058451 Zea mays GRMZM2G058451 N 0.856
Solyc02g079970.2 Solanum lycopersicum Solyc02g079970.2 N 0.856
PGSC0003DMG400021717 Solanum tuberosum PGSC0003DMG400021717 N 0.856
LPERR07G15060 Leersia perrieri LPERR07G15060 N 0.856
Traes_2DS_B05DDA181 Triticum aestivum Traes_2DS_B05DDA181 N 0.843
BRADI1G25470 Brachypodium distachyon BRADI1G25470 N 0.843
Traes_2BS_7190FAD1A Triticum aestivum Traes_2BS_7190FAD1A N 0.843
MLOC_59511 Hordeum vulgare MLOC_59511 N 0.843
Traes_2AS_FE9AC4EDD Triticum aestivum Traes_2AS_FE9AC4EDD N 0.843
F775_29547 Aegilops tauschii F775_29547 N 0.843
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.839