Pavir.J40109 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J40109 T050952_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J40109.1.p bHLH 389 436
Pavir.J40109.2.p bHLH 345 392

Links

Other bHLH family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI02G09060 Oryza rufipogon ORUFI02G09060 N 0.901
BGIOSGA006856 Oryza indica BGIOSGA006856 N 0.901
OS02G0221100 Oryza sativa OS02G0221100 N 0.901
Sb04g007795 Sorghum bicolor Sb04g007795 N 0.901
Si019540m.g Setaria italica Si019540m.g N 0.901
ONIVA11G03290 Oryza nivara ONIVA11G03290 N 0.901
OPUNC02G08070 Oryza punctata OPUNC02G08070 N 0.901
OMERI02G10300 Oryza meridionalis OMERI02G10300 N 0.901
LPERR02G07820 Leersia perrieri LPERR02G07820 N 0.901
OGLUM02G09240 Oryza glumaepatula OGLUM02G09240 N 0.901
GRMZM2G170559 Zea mays GRMZM2G170559 N 0.901
BRADI3G08280 Brachypodium distachyon BRADI3G08280 N 0.893
Traes_6AS_4D5775944 Triticum aestivum Traes_6AS_4D5775944 N 0.880
F775_18168 Aegilops tauschii F775_18168 N 0.880
Pavir.J30600 Panicum virgatum Pavir.J30600 N 0.869
Sb10g022530 Sorghum bicolor Sb10g022530 N 0.869
GRMZM2G340177 Zea mays GRMZM2G340177 N 0.869
Si007981m.g Setaria italica Si007981m.g N 0.869
TRIUR3_19577 Triticum urartu TRIUR3_19577 N 0.867