CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0027s0090
(
Salix purpurea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
SapurV1A.0027s0090
T050983_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.870
0.898
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.847
0.837
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.847
0.837
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0027s0090.1.p
bHLH
417
465
HPRSIAERVRRTRISERMRKLQELFPDMDKQTNTADMLDLAVDHIKNLQ
SapurV1A.0027s0090.2.p
bHLH
348
396
HPRSIAERVRRTRISERMRKLQELFPDMDKQTNTADMLDLAVDHIKNLQ
SapurV1A.0027s0090.4.p
bHLH
348
396
HPRSIAERVRRTRISERMRKLQELFPDMDKQTNTADMLDLAVDHIKNLQ
Links
Other
bHLH
family TFs
Other
Salix purpurea
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy