SapurV1A.0084s0570 (Salix purpurea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SapurV1A.0084s0570 T051009_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8584
0.892 0.804
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
0.884 0.902
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN

NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
0.884 0.902
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV

BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
0.884 0.902
BIM1
M01710_2.00
Arabidopsis thaliana
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH8114
0.864 0.784
BIM1
M06739_2.00
Arabidopsis thaliana
CACGTGAYNHNNNH

DNNNDNRTCACGTG
Dap-seq
OMalley et al.(2016)
BIM1_col_a
0.864 0.784
BIM1
M06740_2.00
Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN

NNNDNDNDNDDRKCACGTGMBN
Dap-seq
OMalley et al.(2016)
BIM1_colamp_a
0.864 0.784
BIM1
M09787_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BIM1_01
0.864 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0084s0570.1.p bHLH 50 100
SapurV1A.0084s0570.2.p bHLH 50 100
SapurV1A.0084s0570.3.p bHLH 20 70
SapurV1A.0084s0570.4.p bHLH 20 70

Links

Other bHLH family TFs
Other Salix purpurea TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
hlh-30 Caenorhabditis elegans WBGene00020930 D 0.000
WUBG_15170 Wuchereria bancrofti WUBG_15170 I 0.000
nDi.2.2.2.g10686 Dirofilaria immitis nDi.2.2.2.g10686 I 0.000
NBR_0000419201 Nippostrongylus brasiliensis NBR_0000419201 I 0.000
nAv.1.0.1.g01464 Acanthocheilonema viteae nAv.1.0.1.g01464 I 0.000
MhA1_Contig2854.frz3.gene1 Meloidogyne hapla MhA1_Contig2854.frz3.gene1 I 0.000
maker-nMf.1.1.scaf11370-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11370-augustus-gene-0.3 I 0.000
L898_g15395 Steinernema monticolum L898_g15395 I 0.000
L893_g28705 Steinernema glaseri L893_g28705 I 0.000
nLs.2.1.2.g08330 Litomosoides sigmodontis nLs.2.1.2.g08330 I 0.000
nOo.2.0.1.g06941 Onchocerca ochengi nOo.2.0.1.g06941 I 0.000
OESDEN_00871 Oesophagostomum dentatum OESDEN_00871 I 0.000
OFLC_0000747401 Onchocerca flexuosa OFLC_0000747401 I 0.000
PEQ_0000740201 Parascaris equorum PEQ_0000740201 I 0.000
PTRK_0001632300 Parastrongyloides trichosuri PTRK_0001632300 I 0.000
RSKR_0000797400 Rhabditophanes kr3021 RSKR_0000797400 I 0.000
scaffold257-EXSNAP2012.8 Pristionchus exspectatus scaffold257-EXSNAP2012.8 I 0.000
SSTP_0000449500 Strongyloides stercoralis SSTP_0000449500 I 0.000
L892_g6408 Steinernema scapterisci L892_g6408 I 0.000
L889_g31943 Steinernema feltiae L889_g31943 I 0.000
L596_g25887 Steinernema carpocapsae L596_g25887 I 0.000
Bm6133 Brugia malayi Bm6133 I 0.000
CBG05364 Caenorhabditis briggsae CBG05364 I 0.000
CBG24924 Caenorhabditis briggsae CBG24924 I 0.000
CBN07317 Caenorhabditis brenneri CBN07317 I 0.000
CRE27827 Caenorhabditis remanei CRE27827 I 0.000
WBGene00240746 Onchocerca volvulus WBGene00240746 I 0.000
Minc08733 Meloidogyne incognita Minc08733 I 0.000
ACAC_0001364601 Angiostrongylus cantonensis ACAC_0001364601 I 0.000
ACOC_0000571601 Angiostrongylus costaricensis ACOC_0000571601 I 0.000
EEL_0001011701 Elaeophora elaphi EEL_0001011701 I 0.000
DME_0000936301 Dracunculus medinensis DME_0000936301 I 0.000
DICVIV_03673 Dictyocaulus viviparus DICVIV_03673 I 0.000
BXY_0064000 Bursaphelenchus xylophilus BXY_0064000 I 0.000
ASIM_0001200001 Anisakis simplex ASIM_0001200001 I 0.000
ANCCEY_12664 Ancylostoma ceylanicum ANCCEY_12664 I 0.000
TCLT_0000727601 Thelazia callipaeda TCLT_0000727601 I 0.000
SMUV_0000920101 Syphacia muris SMUV_0000920101 N 0.000
EVEC_0000993501 Enterobius vermicularis EVEC_0000993501 N 0.000