CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0138s0100
(
Salix purpurea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
SapurV1A.0138s0100
T051023_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.853
0.880
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.853
0.880
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.841
0.800
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0138s0100.1.p
bHLH
150
200
ATDSHSLAERARRDKISERMKMLQDLVPGCIKVIGKALALDEIINYIQSLH
SapurV1A.0138s0100.2.p
bHLH
150
200
ATDSHSLAERARRDKISERMKMLQDLVPGCIKVIGKALALDEIINYIQSLH
SapurV1A.0138s0100.3.p
bHLH
150
208
ATDSHSLAERARRDKISERMKMLQDLVPGCIKFLSMKLEAVNSRMSMSPAIERLHPKDP
Links
Other
bHLH
family TFs
Other
Salix purpurea
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy