Thhalv10009922m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10009922m.g T051219_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.880 0.577
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10009922m bHLH 73 125

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.901
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.901
Bo7g110280 Brassica oleracea Bo7g110280 I 0.901
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.901
Bra019167 Brassica rapa Bra019167 I 0.889
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.883
Pm019419 Prunus mume Pm019419 I 0.881
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.881
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.881
MDP0000246258 Malus domestica MDP0000246258 I 0.881
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.881
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.881
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.881
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.881
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.880
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.880
Bra022562 Brassica rapa Bra022562 I 0.877
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.870
PK11667.1 Cannabis sativa PK11667.1 I 0.870
PK15358.1 Cannabis sativa PK15358.1 I 0.870
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.870
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.870
Ca_22233 Cicer arietinum Ca_22233 I 0.870
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.869
Bo2g048240 Brassica oleracea Bo2g048240 I 0.866
Cagra.1670s0006 Capsella grandiflora Cagra.1670s0006 I 0.863
Carubv10020804m.g Capsella rubella Carubv10020804m.g I 0.863
fgenesh2_kg.2__186__AT1G62975.1 Arabidopsis lyrata fgenesh2_kg.2__186__AT1G62975.1 I 0.863
Bostr.22157s0026 Boechera stricta Bostr.22157s0026 I 0.863
BHLH125 Arabidopsis thaliana AT1G62975 I 0.863
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.857
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.857
30147.m014147 Ricinus communis 30147.m014147 N 0.857
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.857
Ciclev10006639m.g Citrus clementina Ciclev10006639m.g N 0.857
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.857
Thhalv10015297m.g Eutrema salsugineum Thhalv10015297m.g I 0.854
TCM_016134 Theobroma cacao TCM_016134 I 0.853
TCM_016133 Theobroma cacao TCM_016133 I 0.853
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.847
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N 0.846
GLYMA09G27630 Glycine max GLYMA09G27630 N 0.846
Cucsa.302590 Cucumis sativus Cucsa.302590 N 0.842
Carubv10011792m.g Capsella rubella Carubv10011792m.g N 0.840
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.840
MTR_0007s0330 Medicago truncatula MTR_0007s0330 N 0.840
Aquca_013_00494 Aquilegia coerulea Aquca_013_00494 N 0.838