Thhalv10013360m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10013360m.g T051229_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK15505.1
M01125_2.00
Cannabis sativa
NRCACGTGYN

NRCACGTGYN
PBM
Lambert et al.(2019)
pTH10268
0.858 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10013360m bHLH 315 363

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29912.m005337 Ricinus communis 29912.m005337 I 0.868
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I 0.893
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I 0.882
AT5G56960 Arabidopsis thaliana AT5G56960 I 0.893
Bo2g032920 Brassica oleracea Bo2g032920 I 0.882
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I 0.893
Bra035639 Brassica rapa Bra035639 I 0.893
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I 0.914
Carubv10026331m.g Capsella rubella Carubv10026331m.g I 0.914
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.865
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.868
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.869
Cla017100 Citrullus lanatus Cla017100 I 0.869
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.869
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.869
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.893
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.854
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.854
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.873
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.869
GSMUA_Achr7G09080_001 Musa acuminata GSMUA_Achr7G09080_001 N 0.839
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I 0.854
MDP0000119495 Malus domestica MDP0000119495 I 0.868
MDP0000252899 Malus domestica MDP0000252899 I 0.868
MDP0000782908 Malus domestica MDP0000782908 I 0.869
mgf018190m Mimulus guttatus mgf018190m I 0.845
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.858
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.869
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.849
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.849
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.854
PK15505.1 Cannabis sativa PK15505.1 D 0.858
Pm027191 Prunus mume Pm027191 I 0.869
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.868
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.869
Si024546m.g Setaria italica Si024546m.g I 0.849
TCM_037645 Theobroma cacao TCM_037645 I 0.863
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.869