Thhalv10023982m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10023982m.g T051278_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.866 0.941
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.866 0.941
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.853 0.824
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10023982m bHLH 37 87

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH78 Arabidopsis thaliana AT5G48560 D 0.853
BPE Arabidopsis thaliana AT1G59640 D 0.866
Cucsa.197380 Cucumis sativus Cucsa.197380 I 0.866
Cucsa.387680 Cucumis sativus Cucsa.387680 I 0.853
mgf001520m Mimulus guttatus mgf001520m I 0.853
Carubv10026241m.g Capsella rubella Carubv10026241m.g I 0.853
mgf013689m Mimulus guttatus mgf013689m I 0.853
mgf024478m Mimulus guttatus mgf024478m I 0.866
Aquca_002_00402 Aquilegia coerulea Aquca_002_00402 I 0.840
Cucsa.134770 Cucumis sativus Cucsa.134770 I 0.853
Cucsa.005360 Cucumis sativus Cucsa.005360 I 0.866
cassava6039.valid.m1 Manihot esculenta cassava6039.valid.m1 I 0.853
cassava3137.m1 Manihot esculenta cassava3137.m1 I 0.853
cassava23015.valid.m1 Manihot esculenta cassava23015.valid.m1 I 0.866
cassava22865.valid.m1 Manihot esculenta cassava22865.valid.m1 I 0.866
cassava19985.m1 Manihot esculenta cassava19985.m1 I 0.853
cassava19743.m1 Manihot esculenta cassava19743.m1 I 0.866
Aquca_034_00013 Aquilegia coerulea Aquca_034_00013 I 0.853
Aquca_080_00003 Aquilegia coerulea Aquca_080_00003 I 0.853
Carubv10020803m.g Capsella rubella Carubv10020803m.g I 0.866
Carubv10017822m.g Capsella rubella Carubv10017822m.g I 0.851
Carubv10013649m.g Capsella rubella Carubv10013649m.g I 0.853
Cagra.7393s0006 Capsella grandiflora Cagra.7393s0006 I 0.853
Cagra.4331s0005 Capsella grandiflora Cagra.4331s0005 I 0.866
Cagra.4003s0049 Capsella grandiflora Cagra.4003s0049 I 0.848
Cagra.13768s0007 Capsella grandiflora Cagra.13768s0007 I 0.851
Cagra.13153s0001 Capsella grandiflora Cagra.13153s0001 I 0.853
Cagra.0133s0077 Capsella grandiflora Cagra.0133s0077 I 0.853
Bostr.2392s0023 Boechera stricta Bostr.2392s0023 I 0.853
Bostr.22252s0299 Boechera stricta Bostr.22252s0299 I 0.853
Bostr.15774s0231 Boechera stricta Bostr.15774s0231 I 0.853
Bostr.10040s0284 Boechera stricta Bostr.10040s0284 I 0.866
Bostr.0568s0546 Boechera stricta Bostr.0568s0546 I 0.848
cassava1662.valid.m1 Manihot esculenta cassava1662.valid.m1 I 0.866
cassava1299.valid.m1 Manihot esculenta cassava1299.valid.m1 I 0.853
Ca_11728 Cicer arietinum Ca_11728 I 0.853
Ca_01402 Cicer arietinum Ca_01402 I 0.853
VIT_17s0000g05370 Vitis vinifera VIT_17s0000g05370 I 0.866
VIT_17s0000g00430 Vitis vinifera VIT_17s0000g00430 I 0.853
VIT_01s0026g01140 Vitis vinifera VIT_01s0026g01140 I 0.866
TRIUR3_16992 Triticum urartu TRIUR3_16992 I 0.840
TRIUR3_14778 Triticum urartu TRIUR3_14778 I 0.840
Traes_7DS_A4CA05A36 Triticum aestivum Traes_7DS_A4CA05A36 I 0.840
Traes_7BS_33B5A5D5C Triticum aestivum Traes_7BS_33B5A5D5C I 0.840
Traes_7AS_9C4D7BC14 Triticum aestivum Traes_7AS_9C4D7BC14 I 0.840
Traes_5DL_8D5DCE2BA Triticum aestivum Traes_5DL_8D5DCE2BA I 0.840
Traes_5BL_8C181ECA8 Triticum aestivum Traes_5BL_8C181ECA8 I 0.843
Traes_5BL_660903797 Triticum aestivum Traes_5BL_660903797 I 0.840
Traes_5AL_D6D568F0E Triticum aestivum Traes_5AL_D6D568F0E I 0.840
Ca_12391 Cicer arietinum Ca_12391 I 0.853
Ca_15315 Cicer arietinum Ca_15315 I 0.846
30147.m014428 Ricinus communis 30147.m014428 I 0.853
30147.m014038 Ricinus communis 30147.m014038 I 0.866
29736.m002076 Ricinus communis 29736.m002076 I 0.866
29447.m000032 Ricinus communis 29447.m000032 I 0.853
Pm029883 Prunus mume Pm029883 I 0.853
Pm024636 Prunus mume Pm024636 I 0.866
Pm006609 Prunus mume Pm006609 I 0.866
Cla022234 Citrullus lanatus Cla022234 I 0.866
Cla019439 Citrullus lanatus Cla019439 I 0.866
Cla015140 Citrullus lanatus Cla015140 I 0.853
Cla002680 Citrullus lanatus Cla002680 I 0.853
Ca_19529 Cicer arietinum Ca_19529 I 0.866
Ca_18285 Cicer arietinum Ca_18285 I 0.853
Ca_17591 Cicer arietinum Ca_17591 I 0.866
TCM_045748 Theobroma cacao TCM_045748 I 0.866
Carubv10026852m.g Capsella rubella Carubv10026852m.g I 0.853
PDK_20s1612611g001 Phoenix dactylifera PDK_20s1612611g001 I 0.841
SapurV1A.0477s0260 Salix purpurea SapurV1A.0477s0260 I 0.853
SapurV1A.0161s0140 Salix purpurea SapurV1A.0161s0140 I 0.866
SapurV1A.0138s0100 Salix purpurea SapurV1A.0138s0100 I 0.902
SapurV1A.0113s0360 Salix purpurea SapurV1A.0113s0360 I 0.853
SapurV1A.0007s0010 Salix purpurea SapurV1A.0007s0010 I 0.866
Pavir.J31567 Panicum virgatum Pavir.J31567 I 0.840
Pavir.J05386 Panicum virgatum Pavir.J05386 I 0.840
Pavir.Bb00642 Panicum virgatum Pavir.Bb00642 I 0.840
Pavir.Ba03492 Panicum virgatum Pavir.Ba03492 I 0.840
orange1.1g044652m.g Citrus sinensis orange1.1g044652m.g I 0.853
orange1.1g024344m.g Citrus sinensis orange1.1g024344m.g I 0.866
orange1.1g023847m.g Citrus sinensis orange1.1g023847m.g I 0.866
MDP0000299846 Malus domestica MDP0000299846 I 0.866
MDP0000282600 Malus domestica MDP0000282600 I 0.866
SapurV1A.0672s0080 Salix purpurea SapurV1A.0672s0080 I 0.853
SapurV1A.1596s0040 Salix purpurea SapurV1A.1596s0040 I 0.866
LjT17I13.20.nd Lotus japonicus LjT17I13.20.nd I 0.853
LjT09O11.110.nd Lotus japonicus LjT09O11.110.nd I 0.853
chr4.CM0175.440.nc Lotus japonicus chr4.CM0175.440.nc I 0.853
chr3.CM0241.190.nd Lotus japonicus chr3.CM0241.190.nd I 0.853
chr1.LjT06C08.10.nc Lotus japonicus chr1.LjT06C08.10.nc I 0.853
PK28434.1 Cannabis sativa PK28434.1 I 0.841
PK23355.1 Cannabis sativa PK23355.1 I 0.853
PK14657.1 Cannabis sativa PK14657.1 I 0.866
Thhalv10023643m.g Eutrema salsugineum Thhalv10023643m.g I 0.866
Thhalv10020729m.g Eutrema salsugineum Thhalv10020729m.g I 0.853
Thhalv10014242m.g Eutrema salsugineum Thhalv10014242m.g I 0.853
Thhalv10008474m.g Eutrema salsugineum Thhalv10008474m.g I 0.866
Thhalv10004734m.g Eutrema salsugineum Thhalv10004734m.g I 0.848
Thhalv10004031m.g Eutrema salsugineum Thhalv10004031m.g I 0.853
MDP0000215269 Malus domestica MDP0000215269 I 0.866
MDP0000205807 Malus domestica MDP0000205807 I 0.866
Gorai.001G054900 Gossypium raimondii Gorai.001G054900 I 0.841
gene17430-v1.0-hybrid Fragaria vesca gene17430-v1.0-hybrid I 0.853
gene09544-v1.0-hybrid Fragaria vesca gene09544-v1.0-hybrid I 0.866
evm.TU.supercontig_8.103 Carica papaya evm.TU.supercontig_8.103 I 0.853
evm.TU.supercontig_5.303 Carica papaya evm.TU.supercontig_5.303 I 0.866
evm.TU.supercontig_4.112 Carica papaya evm.TU.supercontig_4.112 I 0.853
evm.TU.supercontig_203.5 Carica papaya evm.TU.supercontig_203.5 I 0.866
Eucgr.K02908 Eucalyptus grandis Eucgr.K02908 I 0.866
Eucgr.K02109 Eucalyptus grandis Eucgr.K02109 I 0.853
Eucgr.B03392 Eucalyptus grandis Eucgr.B03392 I 0.866
Eucgr.B00385 Eucalyptus grandis Eucgr.B00385 I 0.853
Ciclev10032412m.g Citrus clementina Ciclev10032412m.g I 0.866
Ciclev10031135m.g Citrus clementina Ciclev10031135m.g I 0.853
Ciclev10021606m.g Citrus clementina Ciclev10021606m.g I 0.866
Gorai.001G103300 Gossypium raimondii Gorai.001G103300 I 0.853
Gorai.001G230000 Gossypium raimondii Gorai.001G230000 I 0.840
MDP0000205113 Malus domestica MDP0000205113 I 0.853
MDP0000195579 Malus domestica MDP0000195579 I 0.866
Lus10033120.g Linum usitatissimum Lus10033120.g I 0.866
Lus10030807.g Linum usitatissimum Lus10030807.g I 0.866
Lus10013284.g Linum usitatissimum Lus10013284.g I 0.866
Lus10003172.g Linum usitatissimum Lus10003172.g I 0.853
Lus10002337.g Linum usitatissimum Lus10002337.g I 0.853
Gorai.011G150200 Gossypium raimondii Gorai.011G150200 I 0.853
Gorai.008G209900 Gossypium raimondii Gorai.008G209900 I 0.841
Gorai.008G053100 Gossypium raimondii Gorai.008G053100 I 0.866
Gorai.007G157700 Gossypium raimondii Gorai.007G157700 I 0.853
Gorai.007G044400 Gossypium raimondii Gorai.007G044400 I 0.853
Gorai.006G225700 Gossypium raimondii Gorai.006G225700 I 0.853
Gorai.005G188700 Gossypium raimondii Gorai.005G188700 I 0.866
Carubv10026916m.g Capsella rubella Carubv10026916m.g I 0.848
LPERR08G15600 Leersia perrieri LPERR08G15600 I 0.853
GLYMA17G10290 Glycine max GLYMA17G10290 I 0.866
GLYMA16G10620 Glycine max GLYMA16G10620 I 0.853
GLYMA08G46040 Glycine max GLYMA08G46040 I 0.853
GLYMA08G40541 Glycine max GLYMA08G40541 I 0.866
GLYMA08G01210 Glycine max GLYMA08G01210 I 0.853
GLYMA06G20000 Glycine max GLYMA06G20000 I 0.866
GLYMA06G17420 Glycine max GLYMA06G17420 I 0.853
GLYMA05G01590 Glycine max GLYMA05G01590 I 0.840
GLYMA04G37690 Glycine max GLYMA04G37690 I 0.853
GLYMA04G34660 Glycine max GLYMA04G34660 I 0.866
GLYMA03G21770 Glycine max GLYMA03G21770 I 0.853
GLYMA02G02942 Glycine max GLYMA02G02942 I 0.866
GLYMA02G02934 Glycine max GLYMA02G02934 I 0.866
GLYMA01G04610 Glycine max GLYMA01G04610 I 0.866
GLYMA18G32560 Glycine max GLYMA18G32560 I 0.853
GRMZM2G008898 Zea mays GRMZM2G008898 I 0.840
LPERR07G05350 Leersia perrieri LPERR07G05350 I 0.840
LPERR05G00200 Leersia perrieri LPERR05G00200 I 0.853
LPERR03G32000 Leersia perrieri LPERR03G32000 I 0.840
GSMUA_Achr9G11020_001 Musa acuminata GSMUA_Achr9G11020_001 I 0.840
GSMUA_Achr9G01040_001 Musa acuminata GSMUA_Achr9G01040_001 I 0.841
GSMUA_Achr7G01750_001 Musa acuminata GSMUA_Achr7G01750_001 I 0.840
GSMUA_Achr6G27780_001 Musa acuminata GSMUA_Achr6G27780_001 I 0.853
GSMUA_Achr6G16480_001 Musa acuminata GSMUA_Achr6G16480_001 I 0.841
GSMUA_Achr4G17570_001 Musa acuminata GSMUA_Achr4G17570_001 I 0.840
GSMUA_Achr2G21460_001 Musa acuminata GSMUA_Achr2G21460_001 I 0.841
GSMUA_Achr1G27010_001 Musa acuminata GSMUA_Achr1G27010_001 I 0.841
GSMUA_Achr10G18410_001 Musa acuminata GSMUA_Achr10G18410_001 I 0.853
GSMUA_Achr10G12020_001 Musa acuminata GSMUA_Achr10G12020_001 I 0.841
GRMZM2G137358 Zea mays GRMZM2G137358 I 0.840
fgenesh2_kg.8__970__AT5G50915.1 Arabidopsis lyrata fgenesh2_kg.8__970__AT5G50915.1 I 0.853
fgenesh2_kg.8__734__AT5G48560.1 Arabidopsis lyrata fgenesh2_kg.8__734__AT5G48560.1 I 0.853
Bo7g089350 Brassica oleracea Bo7g089350 I 0.853
Bo5g141620 Brassica oleracea Bo5g141620 I 0.853
Bo5g010880 Brassica oleracea Bo5g010880 I 0.866
Bo3g024020 Brassica oleracea Bo3g024020 I 0.853
Bo3g024010 Brassica oleracea Bo3g024010 I 0.853
BGIOSGA028884 Oryza indica BGIOSGA028884 I 0.853
BGIOSGA024674 Oryza indica BGIOSGA024674 I 0.840
BGIOSGA018982 Oryza indica BGIOSGA018982 I 0.853
BGIOSGA009622 Oryza indica BGIOSGA009622 I 0.840
BHLH79 Arabidopsis thaliana AT5G62610 I 0.848
BHLH137 Arabidopsis thaliana AT5G50915 I 0.853
BHLH62 Arabidopsis thaliana AT3G07340 I 0.853
AMTR_s00133p00027110 Amborella trichopoda AMTR_s00133p00027110 I 0.866
AMTR_s00016p00138470 Amborella trichopoda AMTR_s00016p00138470 I 0.853
Bo9g015060 Brassica oleracea Bo9g015060 I 0.848
Bra019935 Brassica rapa Bra019935 I 0.866
fgenesh2_kg.8__2257__AT5G62610.1 Arabidopsis lyrata fgenesh2_kg.8__2257__AT5G62610.1 I 0.848
fgenesh1_pg.C_scaffold_5001270 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001270 I 0.851
F775_32624 Aegilops tauschii F775_32624 I 0.840
F775_31425 Aegilops tauschii F775_31425 I 0.840
F775_05676 Aegilops tauschii F775_05676 I 0.843
BRADI4G34350 Brachypodium distachyon BRADI4G34350 I 0.843
BRADI1G54690 Brachypodium distachyon BRADI1G54690 I 0.840
BRADI1G43650 Brachypodium distachyon BRADI1G43650 I 0.840
BRADI1G05037 Brachypodium distachyon BRADI1G05037 I 0.840
Bra037478 Brassica rapa Bra037478 I 0.853
Bra035888 Brassica rapa Bra035888 I 0.848
Bra029640 Brassica rapa Bra029640 I 0.853
Bra022753 Brassica rapa Bra022753 I 0.853
Bra020691 Brassica rapa Bra020691 I 0.853
Al_scaffold_0003_757 Arabidopsis lyrata Al_scaffold_0003_757 I 0.853
MLOC_58414 Hordeum vulgare MLOC_58414 I 0.840
TCM_045701 Theobroma cacao TCM_045701 I 0.866
POPTR_0012s10670 Populus trichocarpa POPTR_0012s10670 I 0.853
POPTR_0010s04920 Populus trichocarpa POPTR_0010s04920 I 0.866
POPTR_0008s19510 Populus trichocarpa POPTR_0008s19510 I 0.853
POPTR_0002s24990 Populus trichocarpa POPTR_0002s24990 I 0.853
PGSC0003DMG401024463 Solanum tuberosum PGSC0003DMG401024463 I 0.866
PGSC0003DMG401022600 Solanum tuberosum PGSC0003DMG401022600 I 0.866
PGSC0003DMG400027042 Solanum tuberosum PGSC0003DMG400027042 I 0.853
PGSC0003DMG400020807 Solanum tuberosum PGSC0003DMG400020807 I 0.853
PGSC0003DMG400019861 Solanum tuberosum PGSC0003DMG400019861 I 0.853
PGSC0003DMG400001930 Solanum tuberosum PGSC0003DMG400001930 I 0.846
OS07G0193800 Oryza sativa OS07G0193800 I 0.840
OS05G0103000 Oryza sativa OS05G0103000 I 0.853
BHLH089 Oryza sativa OS03G0802900 I 0.840
ORUFI08G20920 Oryza rufipogon ORUFI08G20920 I 0.853
POPTR_0015s07930 Populus trichocarpa POPTR_0015s07930 I 0.866
PRUPE_ppa003350mg Prunus persica PRUPE_ppa003350mg I 0.853
TCM_014729 Theobroma cacao TCM_014729 I 0.853
TCM_002737 Theobroma cacao TCM_002737 I 0.853
Solyc09g057710.2 Solanum lycopersicum Solyc09g057710.2 I 0.853
Solyc06g072520.1 Solanum lycopersicum Solyc06g072520.1 I 0.853
Solyc05g006650.2 Solanum lycopersicum Solyc05g006650.2 I 0.866
Solyc04g005130.2 Solanum lycopersicum Solyc04g005130.2 I 0.846
Solyc03g097820.1 Solanum lycopersicum Solyc03g097820.1 I 0.853
Si037131m.g Setaria italica Si037131m.g I 0.840
Si030790m.g Setaria italica Si030790m.g I 0.840
ZCW32 Arabidopsis lyrata scaffold_200689.1 I 0.866
Sb02g005713 Sorghum bicolor Sb02g005713 I 0.840
Sb01g004710 Sorghum bicolor Sb01g004710 I 0.840
PRUPE_ppa009757mg Prunus persica PRUPE_ppa009757mg I 0.866
PRUPE_ppa009543mg Prunus persica PRUPE_ppa009543mg I 0.866
ORUFI07G06050 Oryza rufipogon ORUFI07G06050 I 0.840
ORUFI05G00210 Oryza rufipogon ORUFI05G00210 I 0.853
OGLUM07G05680 Oryza glumaepatula OGLUM07G05680 I 0.840
OGLUM05G00230 Oryza glumaepatula OGLUM05G00230 I 0.853
OBART08G18760 Oryza barthii OBART08G18760 I 0.853
OBART07G06150 Oryza barthii OBART07G06150 I 0.840
OBART05G00180 Oryza barthii OBART05G00180 I 0.853
OBART03G37850 Oryza barthii OBART03G37850 I 0.840
OB07G14580 Oryza brachyantha OB07G14580 I 0.840
OB05G10240 Oryza brachyantha OB05G10240 I 0.853
MTR_8g099880 Medicago truncatula MTR_8g099880 I 0.853
MTR_8g062240 Medicago truncatula MTR_8g062240 I 0.866
MTR_8g012290 Medicago truncatula MTR_8g012290 I 0.853
MTR_7g053410 Medicago truncatula MTR_7g053410 I 0.853
MTR_5g037250 Medicago truncatula MTR_5g037250 I 0.890
MTR_3g498825 Medicago truncatula MTR_3g498825 I 0.853
OGLUM08G19740 Oryza glumaepatula OGLUM08G19740 I 0.853
OLONG_004875 Oryza longistaminata OLONG_004875 I 0.853
ORGLA08G0163300 Oryza glaberrima ORGLA08G0163300 I 0.853
ORGLA07G0051400 Oryza glaberrima ORGLA07G0051400 I 0.840
ORGLA05G0001800 Oryza glaberrima ORGLA05G0001800 I 0.853
ORGLA03G0344800 Oryza glaberrima ORGLA03G0344800 I 0.840
OPUNC07G05880 Oryza punctata OPUNC07G05880 I 0.840
OPUNC05G00160 Oryza punctata OPUNC05G00160 I 0.853
OPUNC03G34870 Oryza punctata OPUNC03G34870 I 0.840
ONIVA12G18400 Oryza nivara ONIVA12G18400 I 0.853
ONIVA07G05030 Oryza nivara ONIVA07G05030 I 0.840
ONIVA05G00200 Oryza nivara ONIVA05G00200 I 0.853
OMERI08G14790 Oryza meridionalis OMERI08G14790 I 0.853
OMERI07G04150 Oryza meridionalis OMERI07G04150 I 0.840
OMERI03G35020 Oryza meridionalis OMERI03G35020 I 0.840
OLONG_024091 Oryza longistaminata OLONG_024091 I 0.840
MLOC_65318 Hordeum vulgare MLOC_65318 I 0.840