Thhalv10027709m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10027709m.g T051298_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK03576.1
M01119_2.00
Cannabis sativa
NCACGTGCN

NGCACGTGN
PBM
Lambert et al.(2019)
pTH10095
0.861 0.633
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027709m bHLH 439 488

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.851
BHLH2 Arabidopsis thaliana AT1G63650 N 0.890
TT8 Arabidopsis thaliana AT4G09820 I 0.842
BHLH127 Arabidopsis thaliana AT4G28815 N 0.846
GL3 Arabidopsis thaliana AT5G41315 I 0.914
Bo4g141990 Brassica oleracea Bo4g141990 I 0.901
Bo9g029230 Brassica oleracea Bo9g029230 N 0.870
Bo9g086910 Brassica oleracea Bo9g086910 N 0.845
Bo9g086920 Brassica oleracea Bo9g086920 N 0.845
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.842
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.890
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.914
Bra025508 Brassica rapa Bra025508 I 0.901
Bra027653 Brassica rapa Bra027653 N 0.870
Bra027796 Brassica rapa Bra027796 N 0.870
Bra037887 Brassica rapa Bra037887 N 0.845
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.842
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.890
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.842
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.914
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.890
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.878
Ca_05750 Cicer arietinum Ca_05750 I 0.875
evm.TU.supercontig_537.2 Carica papaya evm.TU.supercontig_537.2 N 0.840
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.890
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I 0.842
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.914
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.899
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.855
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.875
Gorai.007G023500 Gossypium raimondii Gorai.007G023500 N 0.856
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.840
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.875
mgf005803m Mimulus guttatus mgf005803m I 0.877
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.875
PK03576.1 Cannabis sativa PK03576.1 D 0.861
Pm023805 Prunus mume Pm023805 I 0.899
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.879
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.899
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.854
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.851
TCM_016261 Theobroma cacao TCM_016261 I 0.886
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.870
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.849