|
HHAL001761-PA
(Halyomorpha halys)
bHLH
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00010 (HLH) |
IPR001092 |
HHAL001761-PA |
T051398_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
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|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
HLH4C
M03609_2.00 |
Drosophila melanogaster |
DDNCRCAGCTGYGNHH |
DDNCRCAGCTGYGNHH |
SELEX
Nitta et al.(2015)
HLH4C_1
|
0.911
|
0.962
|
HLH4C
M03610_2.00 |
Drosophila melanogaster |
DRSMYCAGCTGVKSYH |
DRSMBCAGCTGRKSYH |
SELEX
Nitta et al.(2015)
HLH4C_2
|
0.911
|
0.962
|
HLH4C
M03611_2.00 |
Drosophila melanogaster |
NRBMYCAGCTGYGNHH |
DDNCRCAGCTGRKVYN |
SELEX
Nitta et al.(2015)
HLH4C_3
|
0.911
|
0.962
|
HLH4C
M05963_2.00 |
Drosophila melanogaster |
CACCTGMDCC |
GGHKCAGGTG |
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_3_FBgn0011277
|
0.911
|
0.962
|
HLH4C
M05964_2.00 |
Drosophila melanogaster |
MCAYCTGMGMMM |
KKKCKCAGRTGK |
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_4_FBgn0011277
|
0.911
|
0.962
|
HLH4C
M05965_2.00 |
Drosophila melanogaster |
VNHHVCACCTGMBNC |
GNVKCAGGTGBDDNB |
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_FBgn0011277
|
0.911
|
0.962
|
HLH4C
M05966_2.00 |
Drosophila melanogaster |
RGSMYCAGCTGCGYY |
RRCGCAGCTGRKSCY |
B1H
Zhu et al.(2011)
HLH4C_SANGER_5_FBgn0011277
|
0.911
|
0.962
|
NHLH1
M02796_2.00 |
Homo sapiens |
CGCAGCTGCB |
VGCAGCTGCG |
SELEX
Jolma et al.(2013)
NHLH1_1
|
0.894
|
0.923
|
NHLH1
M02797_2.00 |
Homo sapiens |
VGCAGCTGCK |
MGCAGCTGCB |
SELEX
Jolma et al.(2013)
NHLH1_2
|
0.894
|
0.923
|
NHLH1
M04162_2.00 |
Homo sapiens |
NDGNMKCAGCTGCGYCMH |
DKGRCGCAGCTGMKNCHN |
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
|
0.894
|
0.923
|
NHLH1
M04164_2.00 |
Homo sapiens |
NDGNMKCAGCTGCGYCMH |
DKGRCGCAGCTGMKNCHN |
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
|
0.894
|
0.923
|
Nhlh1
M08773_2.00 |
Mus musculus |
BKGGNMNCAGCTGCGBCCYY |
RRGGVCGCAGCTGNKNCCMV |
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
|
0.894
|
0.923
|
NHLH1
M09875_2.00 |
Homo sapiens |
NNDGGNMVCAGCTGVGNCCNNN |
NNNGGNCBCAGCTGBKNCCHNN |
Transfac
Matys et al.(2006)
V$HEN1_01
|
0.894
|
0.923
|
NHLH1
M09876_2.00 |
Homo sapiens |
NDRGGVMGCAGCTGMKNCCHHN |
NDDGGNMKCAGCTGCKBCCYHN |
Transfac
Matys et al.(2006)
V$HEN1_02
|
0.894
|
0.923
|
NHLH1
M04163_2.00 |
Homo sapiens |
NRGBMKCAGCTGCGYCCH |
DGGRCGCAGCTGMKVCYN |
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
|
0.894
|
0.923
|
NHLH1
M04165_2.00 |
Homo sapiens |
DGGNMBCAGCTGCGYCCH |
DGGRCGCAGCTGVKNCCH |
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
|
0.894
|
0.923
|
Nhlh2
M00756_2.00 |
Mus musculus |
NKCAGCTGHN |
NDCAGCTGMN |
PBM
Weirauch et al.(2013)
pTH3037
|
0.894
|
0.904
|
NHLH2
M04177_2.00 |
Homo sapiens |
DDGNMGCAGCTGCGYCMH |
DKGRCGCAGCTGCKNCHH |
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
|
0.894
|
0.904
|
NHLH2
M09878_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HEN2_Q2
|
0.894
|
0.904
|
NHLH2
M04178_2.00 |
Homo sapiens |
DGGNMBCAGCTGCGYCCH |
DGGRCGCAGCTGVKNCCH |
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
|
0.894
|
0.904
|
For this family, TFs with SR scores > 0.838 will likely have a similar motif |