LDEC009949 (Leptinotarsa decemlineata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 LDEC009949 T051509_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH

DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.863 0.846
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC

GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.863 0.846
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC

GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.863 0.846
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY

RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.863 0.846
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC

GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.863 0.846
hlh-1
M00746_2.00
Caenorhabditis elegans
RACAGCTGNN

NNCAGCTGTY
PBM
DeMasi et al.(2011)
HLH-1
0.846 0.827
hlh-1
M00929_2.00
Caenorhabditis elegans
GACAGCTG

CAGCTGTC
PBM
Grove et al.(2009)
HLH1
0.846 0.827
hlh-1
M08063_2.00
Caenorhabditis elegans
VAACAGYTGNY

RNCARCTGTTB
ChIP-seq
Mathelier et al.(2014)
MA0545.1
0.846 0.827
hlh-1
M09481_2.00
Caenorhabditis elegans
NNRNCARNTGNY

RNCANYTGNYNN
Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode
0.846 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC009949-PA bHLH 161 212

Links

Other bHLH family TFs
Other Leptinotarsa decemlineata TFs

Invalid Input OrderBy

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action