Scas_Contig673.33 (Saccharomyces castellii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Scas_Contig673.33 T051641_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBF1
M00374_2.00
Saccharomyces cerevisiae
NCACGTGAY

RTCACGTGN
PBM
Berger et al.(2006)
Cbf1
0.839 0.755
CBF1
M01520_2.00
Saccharomyces cerevisiae
CACGTGAYH

DRTCACGTG
PBM
Zhu et al.(2009)
Cbf1
0.839 0.755
CBF1
M07440_2.00
Saccharomyces cerevisiae
TCACGTGH

DCACGTGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1
0.839 0.755
CBF1
M08485_2.00
Saccharomyces cerevisiae
NCAYRTGN

NCAYRTGN
Misc
DeBoer et al.(2011)
YJR060W_1347
0.839 0.755
CBF1
M09483_2.00
Saccharomyces cerevisiae
KCACGTGAYN

NRTCACGTGM
Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506
0.839 0.755
CBF1
M09897_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_02
0.839 0.755
CBF1
M09898_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_03
0.839 0.755
CBF1
M09899_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_04
0.839 0.755
CBF1
M09900_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_B
0.839 0.755
CBF1
M09901_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_Q6
0.839 0.755
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig673.33 bHLH 196 244

Links

Other bHLH family TFs
Other Saccharomyces castellii TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
12421_YJR060W Saccharomyces mikatae 12421_YJR060W I 0.860
12538_YJR060W Saccharomyces paradoxus 12538_YJR060W I 0.860
13072_YJR060W Saccharomyces bayanus 13072_YJR060W I 0.860
KAFR_0D03630 Kazachstania africana KAFR_0D03630 I 0.860
KLLA0_B13761g Kluyveromyces lactis KLLA0_B13761g N 0.839
Kpol_1054p48 Vanderwaltozyma polyspora Kpol_1054p48 I 0.840
NCAS_0A12210 Naumovozyma castellii NCAS_0A12210 I 0.914
SAKL0D12650g Lachancea kluyveri SAKL0D12650g I 0.860
SKUD_191104 Saccharomyces kudriavzevii SKUD_191104 I 0.860
TBLA_0D03730 Tetrapisispora blattae TBLA_0D03730 I 0.840
CBF1 Saccharomyces cerevisiae YJR060W D 0.839