SMU15030866 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15030866 T051712_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Nhlh2
M00756_2.00
Mus musculus
NKCAGCTGHN

NDCAGCTGMN
PBM
Weirauch et al.(2013)
pTH3037
0.857 0.808
NHLH1
M02796_2.00
Homo sapiens
CGCAGCTGCB

VGCAGCTGCG
SELEX
Jolma et al.(2013)
NHLH1_1
0.857 0.808
NHLH1
M02797_2.00
Homo sapiens
VGCAGCTGCK

MGCAGCTGCB
SELEX
Jolma et al.(2013)
NHLH1_2
0.857 0.808
NHLH1
M04162_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
0.857 0.808
NHLH1
M04164_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
0.857 0.808
NHLH2
M04177_2.00
Homo sapiens
DDGNMGCAGCTGCGYCMH

DKGRCGCAGCTGCKNCHH
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
0.857 0.808
Nhlh1
M08773_2.00
Mus musculus
BKGGNMNCAGCTGCGBCCYY

RRGGVCGCAGCTGNKNCCMV
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
0.857 0.808
NHLH1
M09875_2.00
Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN

NNNGGNCBCAGCTGBKNCCHNN
Transfac
Matys et al.(2006)
V$HEN1_01
0.857 0.808
NHLH1
M09876_2.00
Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN

NDDGGNMKCAGCTGCKBCCYHN
Transfac
Matys et al.(2006)
V$HEN1_02
0.857 0.808
NHLH2
M09878_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEN2_Q2
0.857 0.808
NHLH1
M04163_2.00
Homo sapiens
NRGBMKCAGCTGCGYCCH

DGGRCGCAGCTGMKVCYN
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
0.857 0.808
NHLH1
M04165_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
0.857 0.808
NHLH2
M04178_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
0.857 0.808
HLH4C
M03609_2.00
Drosophila melanogaster
DDNCRCAGCTGYGNHH

DDNCRCAGCTGYGNHH
SELEX
Nitta et al.(2015)
HLH4C_1
0.854 0.750
HLH4C
M03610_2.00
Drosophila melanogaster
DRSMYCAGCTGVKSYH

DRSMBCAGCTGRKSYH
SELEX
Nitta et al.(2015)
HLH4C_2
0.854 0.750
HLH4C
M03611_2.00
Drosophila melanogaster
NRBMYCAGCTGYGNHH

DDNCRCAGCTGRKVYN
SELEX
Nitta et al.(2015)
HLH4C_3
0.854 0.750
HLH4C
M05963_2.00
Drosophila melanogaster
CACCTGMDCC

GGHKCAGGTG
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_3_FBgn0011277
0.854 0.750
HLH4C
M05964_2.00
Drosophila melanogaster
MCAYCTGMGMMM

KKKCKCAGRTGK
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_4_FBgn0011277
0.854 0.750
HLH4C
M05965_2.00
Drosophila melanogaster
VNHHVCACCTGMBNC

GNVKCAGGTGBDDNB
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_FBgn0011277
0.854 0.750
HLH4C
M05966_2.00
Drosophila melanogaster
RGSMYCAGCTGCGYY

RRCGCAGCTGRKSCY
B1H
Zhu et al.(2011)
HLH4C_SANGER_5_FBgn0011277
0.854 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15030866 bHLH 55 107

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HelroG153470 Helobdella robusta HelroG153470 I 0.877
DAPPUDRAFT_66944 Daphnia pulex DAPPUDRAFT_66944 I 0.877
RPRC001173 Rhodnius prolixus RPRC001173 I 0.857
SMAR007908 Strigamia maritima SMAR007908 I 0.857
SPU_009231 Strongylocentrotus purpuratus SPU_009231 I 0.857
PHUM229200 Pediculus humanus PHUM229200 I 0.857
MCINX015834 Melitaea cinxia MCINX015834 I 0.857
L798_00559 Zootermopsis nevadensis L798_00559 I 0.857
LotgiG133561 Lottia gigantea LotgiG133561 I 0.857
NV10733 Nasonia vitripennis NV10733 I 0.857
TC007725 Tribolium castaneum TC007725 I 0.857
Alligator_sinensis_CCG018876.1 Alligator sinensis Alligator_sinensis_CCG018876.1 I 0.857
Cflo_11933--XP_001122281.1_APIME Camponotus floridanus Cflo_11933--XP_001122281.1_APIME I 0.857
Cmyd_10010324 Chelonia mydas Cmyd_10010324 I 0.857
Alligator_sinensis_CCG011163.1 Alligator sinensis Alligator_sinensis_CCG011163.1 I 0.857
Aan_R014318 Calypte anna Aan_R014318 I 0.857
YQE_00442 Dendroctonus ponderosae YQE_00442 I 0.857
YQE_04623 Dendroctonus ponderosae YQE_04623 I 0.857
YQE_11502 Dendroctonus ponderosae YQE_11502 I 0.857
KGM_06532 Danaus plexippus KGM_06532 I 0.857
HelroG94416 Helobdella robusta HelroG94416 I 0.857
ENSSTOG00000019698 Ictidomys tridecemlineatus ENSSTOG00000019698 I 0.857
ENSSTOG00000027988 Ictidomys tridecemlineatus ENSSTOG00000027988 I 0.857
NHLH1 Taeniopygia guttata ENSTGUG00000013389 I 0.857
NHLH2 Sus scrofa ENSSSCG00000006744 I 0.857
NHLH1 Sus scrofa ENSSSCG00000006384 I 0.857
ENSSHAG00000006613 Sarcophilus harrisii ENSSHAG00000006613 I 0.857
ENSSHAG00000015472 Sarcophilus harrisii ENSSHAG00000015472 I 0.857
nhlh2 Tetraodon nigroviridis ENSTNIG00000010331 I 0.857
nhlh2 Takifugu rubripes ENSTRUG00000003636 I 0.857
GB53325 Apis mellifera GB53325 I 0.857
HelroG138545 Helobdella robusta HelroG138545 I 0.857
Cmyd_10014342 Chelonia mydas Cmyd_10014342 I 0.857
GB49291 Apis mellifera GB49291 I 0.857
ENSXMAG00000020348 Xiphophorus maculatus ENSXMAG00000020348 I 0.857
ENSTSYG00000000582 Tarsius syrichta ENSTSYG00000000582 I 0.857
NHLH2 Tursiops truncatus ENSTTRG00000003112 I 0.857
ISCW014797 Ixodes scapularis ISCW014797 I 0.857
ENSP00000302189 Macaca fascicularis ENSP00000302189 I 0.857
AFUN005050 Anopheles funestus AFUN005050 I 0.857
AMAM022568 Anopheles maculatus AMAM022568 I 0.857
AMEC009920 Anopheles melas AMEC009920 I 0.857
AFAF009162 Anopheles farauti AFAF009162 I 0.857
AEPI011485 Anopheles epiroticus AEPI011485 I 0.857
ACUA009159 Anopheles culicifacies ACUA009159 I 0.857
ACUA026679 Anopheles culicifacies ACUA026679 I 0.857
ADIR001683 Anopheles dirus ADIR001683 I 0.857
AMEM004741 Anopheles merus AMEM004741 I 0.857
AMIN011405 Anopheles minimus AMIN011405 I 0.857
LLOJ002704 Lutzomyia longipalpis LLOJ002704 I 0.857
PPAI007861 Phlebotomus papatasi PPAI007861 I 0.857
nRc.2.0.1.g35713 Romanomermis culicivorax nRc.2.0.1.g35713 I 0.857
BGLB013717 Biomphalaria glabrata BGLB013717 I 0.857
ASTEI10641 Anopheles stephensi ASTEI10641 I 0.857
AQUA014034 Anopheles quadriannulatus AQUA014034 I 0.857
ASIS019843 Anopheles sinensis ASIS019843 I 0.857
ACOM036372 Anopheles coluzzii ACOM036372 I 0.857
AATE010880 Anopheles atroparvus AATE010880 I 0.857
Ogr08231 Ophisaurus gracilis Ogr08231 I 0.857
Pvit_07565 Pogona vitticeps Pvit_07565 I 0.857
Ocbimv22001940m.g Octopus bimaculoides Ocbimv22001940m.g I 0.857
Hsal_11874--XP_001122281.1_APIME Harpegnathos saltator Hsal_11874--XP_001122281.1_APIME I 0.857
Gfo_R014815 Geospiza fortis Gfo_R014815 I 0.857
ENSP00000358519-D1 Bos grunniens ENSP00000358519-D1 I 0.857
ENSP00000405915 Macaca fascicularis ENSP00000405915 I 0.857
Sakowv30004475m.g Saccoglossus kowalevskii Sakowv30004475m.g I 0.857
CLEC002464 Cimex lectularius CLEC002464 I 0.857
nhlh1.L Xenopus laevis XB-GENE-989792 I 0.857
AALB004585 Anopheles albimanus AALB004585 I 0.857
AARA003512 Anopheles arabiensis AARA003512 I 0.857
nhlh1 Xenopus tropicalis XB-GENE-989790 I 0.857
nhlh1.S Xenopus laevis XB-GENE-6252028 I 0.857
HHAL001761-PA Halyomorpha halys HHAL001761-PA I 0.857
LDEC000946 Leptinotarsa decemlineata LDEC000946 I 0.857
Nhlh2 Rattus norvegicus ENSRNOG00000054375 I 0.857
NHLH1 Tursiops truncatus ENSTTRG00000001840 I 0.857
ENSFCAG00000028313 Felis catus ENSFCAG00000028313 I 0.857
NHLH1 Homo sapiens ENSG00000171786 D 0.857
NHLH2 Homo sapiens ENSG00000177551 D 0.857
nhlh2 Gasterosteus aculeatus ENSGACG00000014053 I 0.857
ENSFALG00000006103 Ficedula albicollis ENSFALG00000006103 I 0.857
NHLH1 Echinops telfairi ENSETEG00000009677 I 0.857
nhlh2 Danio rerio ENSDARG00000025495 I 0.857
NHLH2 Dasypus novemcinctus ENSDNOG00000008961 I 0.857
NHLH1 Dasypus novemcinctus ENSDNOG00000038600 I 0.857
NHLH1 Equus caballus ENSECAG00000004612 I 0.857
NHLH1 Gallus gallus ENSGALG00000025817 I 0.857
NHLH2 Gorilla gorilla ENSGGOG00000008283 I 0.857
Nhlh1 Rattus norvegicus ENSRNOG00000005166 I 0.857
ENSMEUG00000003022 Macropus eugenii ENSMEUG00000003022 I 0.857
ENSMGAG00000016096 Meleagris gallopavo ENSMGAG00000016096 I 0.857
ENSMICG00000002851 Microcebus murinus ENSMICG00000002851 I 0.857
NHLH1 Loxodonta africana ENSLAFG00000011163 I 0.857
NHLH2 Loxodonta africana ENSLAFG00000007456 I 0.857
NHLH1 Gorilla gorilla ENSGGOG00000015736 I 0.857
ENSGMOG00000020309 Gadus morhua ENSGMOG00000020309 I 0.857
ENSLACG00000011363 Latimeria chalumnae ENSLACG00000011363 I 0.857
ENSCSAG00000000172 Chlorocebus sabaeus ENSCSAG00000000172 I 0.857
ENSCSAG00000000087 Chlorocebus sabaeus ENSCSAG00000000087 I 0.857
BGIBMGA008476 Bombyx mori BGIBMGA008476 I 0.857
CapteG162858 Capitella teleta CapteG162858 I 0.857
CGI_10002829 Crassostrea gigas CGI_10002829 I 0.857
NHLH2 Anolis carolinensis ENSACAG00000003304 I 0.857
AGAP004907 Anopheles gambiae AGAP004907 I 0.857
ADAC006978 Anopheles darlingi ADAC006978 I 0.857
AAEL004428 Aedes aegypti AAEL004428 I 0.857
ACEP10202 Atta cephalotes ACEP10202 I 0.857
ACYPI007008 Acyrthosiphon pisum ACYPI007008 I 0.857
ENSACAG00000010649 Anolis carolinensis ENSACAG00000010649 I 0.857
ENSAMEG00000010851 Ailuropoda melanoleuca ENSAMEG00000010851 I 0.857
NHLH1 Callithrix jacchus ENSCJAG00000005775 I 0.857
NHLH2 Callithrix jacchus ENSCJAG00000012807 I 0.857
NHLH1 Cavia porcellus ENSCPOG00000021596 I 0.857
NHLH2 Cavia porcellus ENSCPOG00000026593 I 0.857
NHLH1 Canis familiaris ENSCAFG00000023513 I 0.857
NHLH2 Canis familiaris ENSCAFG00000009767 I 0.857
ENSAMXG00000026006 Astyanax mexicanus ENSAMXG00000026006 I 0.857
NHLH2 Bos taurus ENSBTAG00000015067 I 0.857
NHLH1 Bos taurus ENSBTAG00000020027 I 0.857
NHLH1 Microcebus murinus ENSMICG00000012700 I 0.857
ENSLOCG00000017787 Lepisosteus oculatus ENSLOCG00000017787 I 0.857
NHLH2 Pan troglodytes ENSPTRG00000001149 I 0.857
ENSPPYG00000000988 Pongo abelii ENSPPYG00000000988 I 0.857
NHLH1 Pan troglodytes ENSPTRG00000001551 I 0.857
ENSONIG00000021015 Oreochromis niloticus ENSONIG00000021015 I 0.857
NHLH2 Otolemur garnettii ENSOGAG00000034540 I 0.857
ENSONIG00000020673 Oreochromis niloticus ENSONIG00000020673 I 0.857
ENSPPYG00000000632 Pongo abelii ENSPPYG00000000632 I 0.857
ENSPFOG00000020651 Poecilia formosa ENSPFOG00000020651 I 0.857
ENSPANG00000001481 Papio anubis ENSPANG00000001481 I 0.857
NHLH2 Ochotona princeps ENSOPRG00000006661 I 0.857
ENSPANG00000011970 Papio anubis ENSPANG00000011970 I 0.857
NHLH2 Myotis lucifugus ENSMLUG00000015989 I 0.857
NHLH1 Procavia capensis ENSPCAG00000009061 I 0.857
NHLH1 Otolemur garnettii ENSOGAG00000010592 I 0.857
NHLH2 Oryctolagus cuniculus ENSOCUG00000015744 I 0.857
ENSMPUG00000019387 Mustela putorius furo ENSMPUG00000019387 I 0.857
NHLH2 Pteropus vampyrus ENSPVAG00000012688 I 0.857
NHLH1 Monodelphis domestica ENSMODG00000024591 I 0.857
NHLH2 Monodelphis domestica ENSMODG00000023228 I 0.857
ENSMMUG00000008971 Macaca mulatta ENSMMUG00000008971 I 0.857
NHLH1 Macaca mulatta ENSMMUG00000021865 I 0.857
NHLH1 Pteropus vampyrus ENSPVAG00000007987 I 0.857
ENSMPUG00000019473 Mustela putorius furo ENSMPUG00000019473 I 0.857
NHLH2 Ornithorhynchus anatinus ENSOANG00000009820 I 0.857
ENSNLEG00000013637 Nomascus leucogenys ENSNLEG00000013637 I 0.857
Nhlh1 Mus musculus ENSMUSG00000051251 D 0.857
Nhlh2 Mus musculus ENSMUSG00000048540 D 0.857
HLH4C Drosophila melanogaster FBgn0011277 D 0.854
MDOA007431 Musca domestica MDOA007431 I 0.854
GA15893 Drosophila pseudoobscura FBgn0075909 I 0.854
MDOA013398 Musca domestica MDOA013398 I 0.854
GL14555 Drosophila persimilis FBgn0152160 I 0.854
GK16457 Drosophila willistoni FBgn0218459 I 0.854
GJ15714 Drosophila virilis FBgn0202902 I 0.854
GF20856 Drosophila ananassae FBgn0097862 I 0.854
LCUP012274 Lucilia cuprina LCUP012274 I 0.854
MESCA010279 Megaselia scalaris MESCA010279 I 0.854
GD16284 Drosophila simulans FBgn0187911 I 0.854
GE16844 Drosophila yakuba FBgn0234336 I 0.854
GG18528 Drosophila erecta FBgn0110741 I 0.854
GI16068 Drosophila mojavensis FBgn0138817 I 0.854
GH17630 Drosophila grimshawi FBgn0125100 I 0.854
GM12676 Drosophila sechellia FBgn0167612 I 0.854
BXY_0231500 Bursaphelenchus xylophilus BXY_0231500 I 0.847
HMEL010237 Heliconius melpomene HMEL010237 I 0.846
Cmyd_10001044 Chelonia mydas Cmyd_10001044 I 0.845
nDi.2.2.2.g01604 Dirofilaria immitis nDi.2.2.2.g01604 N 0.838
nAv.1.0.1.g06563 Acanthocheilonema viteae nAv.1.0.1.g06563 N 0.838
OFLC_0001357601 Onchocerca flexuosa OFLC_0001357601 N 0.838
LOAG_02658 Loa loa LOAG_02658 N 0.838
WUBG_01613 Wuchereria bancrofti WUBG_01613 N 0.838
Bm2735 Brugia malayi Bm2735 N 0.838
EEL_0000426601 Elaeophora elaphi EEL_0000426601 N 0.838