myc (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-6052814 T051829_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC
M08054_2.00 		Homo sapiens
NNSCACGTGGNN
NNCCACGTGSNN		 ChIP-seq
Mathelier et al.(2014)
MA0147.3 		0.861 0.740
MYC
M07799_2.00 		Homo sapiens
VNSCACGTGG
CCACGTGSNB		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CMYC_Stanford 		0.861 0.740
MYC
M07800_2.00 		Homo sapiens
NNSCACGTGGB
VCCACGTGSNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_CMYC_UT-A 		0.861 0.740
MYC
M07801_2.00 		Homo sapiens
VNVCACGTGGN
NCCACGTGBNB		 ChIP-seq
Gerstein et al.(2012)
K562_CMYC_Stanford 		0.861 0.740
MYC
M07802_2.00 		Homo sapiens
VSCRCGTGBNB
VNVCACGYGSB		 ChIP-seq
Gerstein et al.(2012)
K562_CMYC_UT-A 		0.861 0.740
MYC
M07803_2.00 		Homo sapiens
CACGTGSH
DSCACGTG		 ChIP-seq
Gerstein et al.(2012)
MCF-7_CMYC_UT-A 		0.861 0.740
MYC
M07804_2.00 		Homo sapiens
NSCACGTGKBN
NVMCACGTGSN		 ChIP-seq
Gerstein et al.(2012)
NB4_CMYC_Stanford 		0.861 0.740
MYC
M08729_2.00 		Homo sapiens
VNVCACRTGGN
NCCAYGTGBNB		 Misc
Kulakovskiy et al.(2013)
MYC_HUMAN.H11MO.0.A 		0.861 0.740
MYC
M09457_2.00 		Homo sapiens
CACGTGSN
NSCACGTG		 Misc
Heinz et al.(2010)
LNCAP-cMyc_Unpublished 		0.861 0.740
MYC
M09850_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYC_01 		0.861 0.740
MYC
M09851_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYC_02 		0.861 0.740
MYC
M09852_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYC_Q3 		0.861 0.740
MYC
M09853_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYC_Q6_01 		0.861 0.740
MYC
M09854_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYC_02 		0.861 0.740
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH64880 bHLH 334 386
AAH64880 bHLH 394 418

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action