CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
neurog2.L
(
Xenopus laevis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
XB-GENE-6077660
T051832_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tap
M05967_2.00
Drosophila melanogaster
YGACATVTGS
SCABATGTCA
B1H
Zhu et al.(2011)
tap_da_SANGER_5_2_FBgn0015550
0.859
0.750
tap
M05968_2.00
Drosophila melanogaster
RBRACAKATGK
MCATMTGTYVY
B1H
Zhu et al.(2011)
tap_da_SANGER_5_FBgn0015550
0.859
0.750
Neurog1
M01748_2.00
Mus musculus
DVMRTATGKB
VMCATAYKBH
PBM
Weirauch et al.(2014)
pTH5270
0.842
0.865
NEUROG1
M04201_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG1_eDBD_HT-SELEX
0.842
0.865
NEUROG1
M04203_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG1_FL_HT-SELEX
0.842
0.865
NEUROG1
M04202_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG1_eDBD_Methyl-HT-SELEX
0.842
0.865
NEUROG1
M04204_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG1_FL_Methyl-HT-SELEX
0.842
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAC60031
bHLH
82
134
RRVKANNRERNRMHNLNSALDSLREVLPSLPEDAKLTKIETLRFAYNYIWALS
AAI69688
bHLH
82
134
RRVKANNRERNRMHNLNSALDSLREVLPSLPEDAKLTKIETLRFAYNYIWALS
AAI69690
bHLH
82
134
RRVKANNRERNRMHNLNSALDSLREVLPSLPEDAKLTKIETLRFAYNYIWALS
Links
Other
bHLH
family TFs
Other
Xenopus laevis
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CPIJ009873
Culex quinquefasciatus
CPIJ009873
I
0.840
CpipJ_CPIJ009873
Culex pipiens
CpipJ_CPIJ009873
I
0.840
NEUROG1
Anolis carolinensis
ENSACAG00000001255
I
0.845
ENSAMEG00000017891
Ailuropoda melanoleuca
ENSAMEG00000017891
I
0.842
NEUROG1
Bos taurus
ENSBTAG00000003331
I
0.842
NEUROG1
Canis familiaris
ENSCAFG00000001083
I
0.842
NEUROG1
Callithrix jacchus
ENSCJAG00000005899
I
0.842
NEUROG1
Cavia porcellus
ENSCPOG00000020630
I
0.842
ENSCSAG00000000502
Chlorocebus sabaeus
ENSCSAG00000000502
I
0.842
neurog3
Danio rerio
ENSDARG00000016951
I
0.845
NEUROG1
Dasypus novemcinctus
ENSDNOG00000018026
I
0.842
NEUROG3
Echinops telfairi
ENSETEG00000015577
I
0.849
NEUROG1
Homo sapiens
ENSG00000181965
D
0.842
NEUROG1
Gorilla gorilla
ENSGGOG00000002841
I
0.842
ENSLACG00000002633
Latimeria chalumnae
ENSLACG00000002633
I
0.852
ENSLACG00000010664
Latimeria chalumnae
ENSLACG00000010664
I
0.855
NEUROG1
Loxodonta africana
ENSLAFG00000010799
I
0.842
NEUROG1
Myotis lucifugus
ENSMLUG00000004571
I
0.842
NEUROG1
Macaca mulatta
ENSMMUG00000004770
I
0.842
ENSMPUG00000019792
Mustela putorius furo
ENSMPUG00000019792
I
0.842
Neurog1
Mus musculus
ENSMUSG00000048904
D
0.842
ENSNLEG00000018460
Nomascus leucogenys
ENSNLEG00000018460
I
0.842
NEUROG1
Otolemur garnettii
ENSOGAG00000033152
I
0.842
ENSP00000317580
Macaca fascicularis
ENSP00000317580
I
0.842
ENSPANG00000004163
Papio anubis
ENSPANG00000004163
I
0.842
ENSPPYG00000015801
Pongo abelii
ENSPPYG00000015801
I
0.842
ENSPSIG00000004125
Pelodiscus sinensis
ENSPSIG00000004125
N
0.859
NEUROG1
Pan troglodytes
ENSPTRG00000017258
I
0.842
Neurog1
Rattus norvegicus
ENSRNOG00000022405
I
0.842
NEUROG1
Sus scrofa
ENSSSCG00000014309
I
0.842
ENSSTOG00000022759
Ictidomys tridecemlineatus
ENSSTOG00000022759
I
0.842
tap
Drosophila melanogaster
FBgn0015550
D
0.859
GG13612
Drosophila erecta
FBgn0105877
I
0.859
GM25695
Drosophila sechellia
FBgn0180552
I
0.859
GD14703
Drosophila simulans
FBgn0186381
I
0.859
GE19908
Drosophila yakuba
FBgn0237238
I
0.859
Myotis_brandtii_Cxcl14_10032619
Myotis brandtii
Myotis_brandtii_Cxcl14_10032619
I
0.842
SMAR001477
Strigamia maritima
SMAR001477
I
0.847
SMAR010329
Strigamia maritima
SMAR010329
N
0.847
neurog2
Xenopus tropicalis
XB-GENE-491040
N
0.879
neurog1
Xenopus tropicalis
XB-GENE-491452
N
0.854
neurog3.S
Xenopus laevis
XB-GENE-6055069
I
0.845
neurog2.S
Xenopus laevis
XB-GENE-6252035
N
0.847
neurog3
Xenopus tropicalis
XB-GENE-876279
I
0.845
XP_002935814
Xenopus tropicalis
XP_002935814
I
0.845