CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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myod1.L
(
Xenopus laevis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
XB-GENE-6252600
T051845_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY
RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.843
0.865
MYF5
M09821_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.843
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAA49902
bHLH
97
148
RRRAATMRERRRLSKVNDAFETLKRCTSTNPNQRLPKVDILRNAISYIDSLQ
AAH73672
bHLH
98
149
RRRAATMRERRRLSKVNDAFETLKRCTSTNPNQRLPKVDILRNAISYIDSLQ
Links
Other
bHLH
family TFs
Other
Xenopus laevis
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy