mitf.S (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-6464338 T051877_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN

NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.914 1.000
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN

NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.914 1.000
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH

DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.914 1.000
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY

RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.914 1.000
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB

VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.914 1.000
MITF
M09880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.914 1.000
MITF
M09881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.914 1.000
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN

NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.914 0.981
Tfe3
M05833_2.00
Mus musculus
CACGTGAY

RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.914 0.981
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.914 0.981
Tfe3
M09884_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.914 0.981
TFE3
M02773_2.00
Homo sapiens
VNCACGTGMY

RKCACGTGNB
SELEX
Jolma et al.(2013)
TFE3_1
0.871 0.963
TFE3
M04058_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX
0.871 0.963
TFE3
M08709_2.00
Homo sapiens
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B
0.871 0.963
TFE3
M09790_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_Q6
0.871 0.963
TFE3
M04059_2.00
Homo sapiens
NRTCACATGBB

VVCATGTGAYN
SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX
0.871 0.963
Tfec
M00755_2.00
Mus musculus
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2013)
pTH2885
0.870 0.926
Tfec
M01736_2.00
Mus musculus
NCNCRTGVYN

NRBCAYGNGN
PBM
Weirauch et al.(2014)
pTH5065
0.870 0.926
TFEC
M02778_2.00
Homo sapiens
RNCACRTGAB

VTCAYGTGNY
SELEX
Jolma et al.(2013)
TFEC_1
0.870 0.907
TFEC
M04078_2.00
Homo sapiens
NVCACGTGACN

NGTCACGTGBN
SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX
0.870 0.907
TFEC
M04079_2.00
Homo sapiens
VNCATGTGAYN

NRTCACATGNB
SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX
0.870 0.907
Tfeb
M01728_2.00
Mus musculus
CWCGTGAY

RTCACGWG
PBM
Weirauch et al.(2014)
pTH5072
0.855 0.889
TFEB
M02781_2.00
Homo sapiens
RNCACGTGAY

RTCACGTGNY
SELEX
Jolma et al.(2013)
TFEB_1
0.855 0.889
TFEB
M02727_2.00
Homo sapiens
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2010)
TFEB_dimer
0.855 0.889
TFEB
M04088_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX
0.855 0.889
TFEB
M08718_2.00
Homo sapiens
CACGTGAYY

RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C
0.855 0.889
Tfeb
M08753_2.00
Mus musculus
CACGTGAYY

RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C
0.855 0.889
TFEB
M04089_2.00
Homo sapiens
VNCATGTGAYN

NRTCACATGNB
SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX
0.855 0.889
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI66049 bHLH 267 320
BAD08297 bHLH 181 234
BAD08298 bHLH 272 325

Links

Other bHLH family TFs
Other Xenopus laevis TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CANTEDRAFT_91588 Candida tenuis CANTEDRAFT_91588 I 0.000
KUCA_T00003418001 Kuraishia capsulata KUCA_T00003418001 I 0.000
KAFR_0B05130 Kazachstania africana KAFR_0B05130 I 0.000
GNLVRS01_PISO0N06899g Millerozyma farinosa GNLVRS01_PISO0N06899g I 0.000
GNLVRS01_PISO0M06766g Millerozyma farinosa GNLVRS01_PISO0M06766g I 0.000
NCAS_0D01260 Naumovozyma castellii NCAS_0D01260 I 0.000
DEHA2F25916g Debaryomyces hansenii DEHA2F25916g I 0.000
KLTH0E09548g Lachancea thermotolerans KLTH0E09548g I 0.000
estExt_fgenesh1_pg.C_30055 Sporobolomyces roseus estExt_fgenesh1_pg.C_30055 I 0.000
KLTH0E09548g Kluyveromyces thermotolerans KLTH0E09548g I 0.000
PGUG_05533 Meyerozyma guilliermondii PGUG_05533 N 0.000
PAS_chr4_0271 Komagataella pastoris PAS_chr4_0271 N 0.000
18683_YMR136W Saccharomyces bayanus 18683_YMR136W N 0.000
NDAI_0H02900 Naumovozyma dairenensis NDAI_0H02900 N 0.000
GNLVRS01_PISO0D10981g Millerozyma farinosa GNLVRS01_PISO0D10981g N 0.000
TPHA_0G02130 Tetrapisispora phaffii TPHA_0G02130 N 0.000
Kwal_17849 Kluyveromyces waltii Kwal_17849 N 0.000
LELG_01761 Lodderomyces elongisporus LELG_01761 N 0.000
LELG_00583 Lodderomyces elongisporus LELG_00583 N 0.000
SAKL0E04862g Lachancea kluyveri SAKL0E04862g N 0.000
XP_002493684.1 Pichia pastoris XP_002493684.1 N 0.000
Kpol_1041p26 Vanderwaltozyma polyspora Kpol_1041p26 N 0.000
PICST_31414 Scheffersomyces stipitis PICST_31414 N 0.000
PICST_80055 Scheffersomyces stipitis PICST_80055 N 0.000
SKUD_182801 Saccharomyces kudriavzevii SKUD_182801 N 0.000
ZYRO0E01738g Zygosaccharomyces rouxii ZYRO0E01738g N 0.000
ZYRO0A08536g Zygosaccharomyces rouxii ZYRO0A08536g N 0.000
ZBAI_06445 Zygosaccharomyces bailii ZBAI_06445 N 0.000
ZBAI_04886 Zygosaccharomyces bailii ZBAI_04886 N 0.000
ZBAI_01897 Zygosaccharomyces bailii ZBAI_01897 N 0.000
GAT2 Saccharomyces cerevisiae YMR136W N 0.000
YALI0_E31757g Yarrowia lipolytica YALI0_E31757g N 0.000
estExt_gwp_genewisePlus_worm.C_chr_1.10003 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_1.10003 N 0.000
TDEL_0G03430 Torulaspora delbrueckii TDEL_0G03430 N 0.000
fgenesh1_pg.C_chr_4.1000285 Pichia stipitis fgenesh1_pg.C_chr_4.1000285 N 0.000
SPAPADRAFT_66267 Spathaspora passalidarum SPAPADRAFT_66267 N 0.000
16771_YMR136W Saccharomyces paradoxus 16771_YMR136W N 0.000
SU7_0667 Saccharomyces arboricola SU7_0667 N 0.000
KLLA0_F17116g Kluyveromyces lactis KLLA0_F17116g N 0.000
CLUG_05535 Clavispora lusitaniae CLUG_05535 N 0.000
CD36_17070 Candida dubliniensis CD36_17070 N 0.000
CD36_04890 Candida dubliniensis CD36_04890 N 0.000
CaO19.9150 Candida albicans CaO19.9150 N 0.000
CaO19.4056 Candida albicans CaO19.4056 N 0.000
CaO19.1577 Candida albicans CaO19.1577 N 0.000
CaO19.11538 Candida albicans CaO19.11538 N 0.000
CLUG_05535 Candida lusitaniae CLUG_05535 N 0.000
CAGL0L06776g Candida glabrata CAGL0L06776g N 0.000
AWRI1499_1045 Brettanomyces bruxellensis AWRI1499_1045 N 0.000
AGOS_ADR249W Ashbya gossypii AGOS_ADR249W N 0.000
AACERI_AaceriADR249W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR249W N 0.000
PGUG_05533 Candida guilliermondii PGUG_05533 N 0.000
CPAG_05034 Candida parapsilosis CPAG_05034 N 0.000
CORT_0A05720 Candida orthopsilosis CORT_0A05720 N 0.000
CORT_0B09130 Candida orthopsilosis CORT_0B09130 N 0.000
KLLA0_F09757g Kluyveromyces lactis KLLA0_F09757g N 0.000
KAFR_0B05930 Kazachstania africana KAFR_0B05930 N 0.000
HPODL_00641 Ogataea parapolymorpha HPODL_00641 N 0.000
HPODL_00130 Ogataea parapolymorpha HPODL_00130 N 0.000
GNLVRS01_PISO0L13827g Millerozyma farinosa GNLVRS01_PISO0L13827g N 0.000
GNLVRS01_PISO0K13826g Millerozyma farinosa GNLVRS01_PISO0K13826g N 0.000
GNLVRS01_PISO0C10914g Millerozyma farinosa GNLVRS01_PISO0C10914g N 0.000
G210_5792 Candida maltosa G210_5792 N 0.000
G210_1773 Candida maltosa G210_1773 N 0.000
Ecym_6060 Eremothecium cymbalariae Ecym_6060 N 0.000
DEHA2G03432g Debaryomyces hansenii DEHA2G03432g N 0.000
DEHA2E07172g Debaryomyces hansenii DEHA2E07172g N 0.000
CTRG_04523 Candida tropicalis CTRG_04523 N 0.000
CTRG_01401 Candida tropicalis CTRG_01401 N 0.000
CPAG_02095 Candida parapsilosis CPAG_02095 N 0.000