XP_002935814 (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XP_002935814 T051963_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEUROG2
M02799_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_1
0.842 0.885
NEUROG2
M02800_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_2
0.842 0.885
NEUROG2
M04179_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_HT-SELEX
0.842 0.885
NEUROG2
M04181_2.00
Homo sapiens
RVCATRTGBY

RVCAYATGBY
SELEX
Yin et al.(2017)
NEUROG2_FL_HT-SELEX
0.842 0.885
Neurog2
M08758_2.00
Mus musculus
VBRRCAGATGGB

VCCATCTGYYVB
Misc
Kulakovskiy et al.(2013)
NGN2_MOUSE.H11MO.0.C
0.842 0.885
NEUROG2
M09879_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NGN2_Q3
0.842 0.885
NEUROG2
M04180_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_Methyl-HT-SELEX
0.842 0.885
NEUROG2
M04182_2.00
Homo sapiens
RMCRTRTGYY

RRCAYAYGKY
SELEX
Yin et al.(2017)
NEUROG2_FL_Methyl-HT-SELEX
0.842 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002935814 bHLH 185 237

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA026156 Oryza indica BGIOSGA026156 N 0.000
F775_28106 Aegilops tauschii F775_28106 N 0.000
GRMZM2G151266 Zea mays GRMZM2G151266 N 0.000
LPERR07G19470 Leersia perrieri LPERR07G19470 N 0.000
MLOC_6327 Hordeum vulgare MLOC_6327 N 0.000
OB07G27970 Oryza brachyantha OB07G27970 N 0.000
OBART07G22470 Oryza barthii OBART07G22470 N 0.000
OGLUM07G22360 Oryza glumaepatula OGLUM07G22360 N 0.000
OMERI07G18770 Oryza meridionalis OMERI07G18770 N 0.000
ONIVA07G21870 Oryza nivara ONIVA07G21870 N 0.000
OPUNC07G21080 Oryza punctata OPUNC07G21080 N 0.000
ORUFI07G23500 Oryza rufipogon ORUFI07G23500 N 0.000
OS07G0619600 Oryza sativa OS07G0619600 N 0.000
Pavir.Ib01030 Panicum virgatum Pavir.Ib01030 N 0.000
Pavir.J13571 Panicum virgatum Pavir.J13571 N 0.000
Si033977m.g Setaria italica Si033977m.g N 0.000
TRAES3BF066700010CFD_g Triticum aestivum TRAES3BF066700010CFD_g N 0.000
Traes_2AS_A117C8692 Triticum aestivum Traes_2AS_A117C8692 N 0.000
Traes_2BS_2530470BF Triticum aestivum Traes_2BS_2530470BF N 0.000
Traes_2DS_199F7B30E Triticum aestivum Traes_2DS_199F7B30E N 0.000
Traes_3DS_796E4C73A Triticum aestivum Traes_3DS_796E4C73A N 0.000
TRIUR3_27662 Triticum urartu TRIUR3_27662 N 0.000