XP_002937284 (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XP_002937284 T051964_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN

NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.914 1.000
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.914 1.000
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY

RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.914 1.000
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.914 1.000
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.914 1.000
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.914 1.000
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY

RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.914 1.000
ATOH1
M09877_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.914 1.000
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY

RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.914 1.000
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY

RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937284 bHLH 108 160

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATOH1 Otolemur garnettii ENSOGAG00000030783 I 0.914
ATOH1 Ochotona princeps ENSOPRG00000008973 I 0.914
ENSPANG00000000252 Papio anubis ENSPANG00000000252 I 0.914
ATOH1 Oryctolagus cuniculus ENSOCUG00000013154 I 0.914
Atoh1 Mus musculus ENSMUSG00000073043 D 0.914
ATOH1 Macaca mulatta ENSMMUG00000002367 I 0.914
ATOH1 Monodelphis domestica ENSMODG00000019270 I 0.914
ENSMPUG00000019092 Mustela putorius furo ENSMPUG00000019092 I 0.914
ENSPPYG00000015283 Pongo abelii ENSPPYG00000015283 I 0.914
ATOH1 Pan troglodytes ENSPTRG00000031141 I 0.914
ENSBTAP00000003762-D1 Bos grunniens ENSBTAP00000003762-D1 I 0.914
ENSP00000302216 Macaca fascicularis ENSP00000302216 I 0.914
Myotis_brandtii_ATOH1_10005345 Myotis brandtii Myotis_brandtii_ATOH1_10005345 I 0.914
ATOH1 Tupaia belangeri ENSTBEG00000003291 I 0.914
ENSSTOG00000009183 Ictidomys tridecemlineatus ENSSTOG00000009183 I 0.914
Atoh1 Rattus norvegicus ENSRNOG00000006383 I 0.914
ENSSHAG00000009094 Sarcophilus harrisii ENSSHAG00000009094 I 0.914
ATOH1 Sus scrofa ENSSSCG00000009196 I 0.914
ATOH1 Myotis lucifugus ENSMLUG00000008044 I 0.914
ENSNLEG00000018621 Nomascus leucogenys ENSNLEG00000018621 I 0.914
ATOH1 Dasypus novemcinctus ENSDNOG00000018799 I 0.914
ATOH1 Equus caballus ENSECAG00000001213 I 0.914
ENSMEUG00000009664 Macropus eugenii ENSMEUG00000009664 I 0.914
ATOH1 Homo sapiens ENSG00000172238 D 0.914
ENSCSAG00000000408 Chlorocebus sabaeus ENSCSAG00000000408 I 0.914
ATOH1 Callithrix jacchus ENSCJAG00000022028 I 0.914
ATOH1 Bos taurus ENSBTAG00000002895 I 0.914
ATOH1 Canis familiaris ENSCAFG00000010016 I 0.914
ATOH1 Choloepus hoffmanni ENSCHOG00000000748 I 0.914
ATOH1 Gorilla gorilla ENSGGOG00000001096 I 0.914
ATOH1 Echinops telfairi ENSETEG00000019807 I 0.914
ENSLAFG00000023246 Loxodonta africana ENSLAFG00000023246 I 0.914
ENSLACG00000005491 Latimeria chalumnae ENSLACG00000005491 I 0.890
ENSLOCG00000017552 Lepisosteus oculatus ENSLOCG00000017552 I 0.884
atoh1a Danio rerio ENSDARG00000055294 I 0.884
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I 0.868
atoh1a Oryzias latipes ENSORLG00000004876 I 0.860
atoh1a Tetraodon nigroviridis ENSTNIG00000017584 I 0.860
atoh1a Takifugu rubripes ENSTRUG00000012647 I 0.860
ENSXMAG00000015349 Xiphophorus maculatus ENSXMAG00000015349 I 0.860
ENSONIG00000015058 Oreochromis niloticus ENSONIG00000015058 I 0.860
ENSPFOG00000019101 Poecilia formosa ENSPFOG00000019101 I 0.860
ENSLOCG00000011944 Lepisosteus oculatus ENSLOCG00000011944 I 0.842
ENSXMAG00000009786 Xiphophorus maculatus ENSXMAG00000009786 I 0.842
ENSAMXG00000003022 Astyanax mexicanus ENSAMXG00000003022 I 0.842
atoh1b Danio rerio ENSDARG00000099564 I 0.842
ENSONIG00000017784 Oreochromis niloticus ENSONIG00000017784 I 0.842
ENSPFOG00000023785 Poecilia formosa ENSPFOG00000023785 I 0.842
Sakowv30002492m.g Saccoglossus kowalevskii Sakowv30002492m.g I 0.840
ENSGMOG00000019019 Gadus morhua ENSGMOG00000019019 I 0.840
ISCW003667 Ixodes scapularis ISCW003667 I 0.838