12538_YJR060W (Saccharomyces paradoxus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 12538_YJR060W T051974_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBF1
M00374_2.00
Saccharomyces cerevisiae
NCACGTGAY

RTCACGTGN
PBM
Berger et al.(2006)
Cbf1
0.893 0.980
CBF1
M01520_2.00
Saccharomyces cerevisiae
CACGTGAYH

DRTCACGTG
PBM
Zhu et al.(2009)
Cbf1
0.893 0.980
CBF1
M07440_2.00
Saccharomyces cerevisiae
TCACGTGH

DCACGTGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1
0.893 0.980
CBF1
M08485_2.00
Saccharomyces cerevisiae
NCAYRTGN

NCAYRTGN
Misc
DeBoer et al.(2011)
YJR060W_1347
0.893 0.980
CBF1
M09483_2.00
Saccharomyces cerevisiae
KCACGTGAYN

NRTCACGTGM
Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506
0.893 0.980
CBF1
M09897_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_02
0.893 0.980
CBF1
M09898_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_03
0.893 0.980
CBF1
M09899_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_04
0.893 0.980
CBF1
M09900_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_B
0.893 0.980
CBF1
M09901_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_Q6
0.893 0.980
CBF1
M00010_2.00
Saccharomyces cerevisiae
NDCACGTGANN

NNTCACGTGHN
PBM
Badis et al.(2008)
CBF1_2160
0.882 0.959
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
12538_YJR060W bHLH 221 269

Links

Other bHLH family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action