chr5.CM0200.1030.nc (Lotus japonicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 chr5.CM0200.1030.nc T052050_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0200.1030.nc bHLH 162 204

Links

Other bHLH family TFs
Other Lotus japonicus TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27733.m000033 Ricinus communis 27733.m000033 N 0.858
28405.m000015 Ricinus communis 28405.m000015 N 0.879
29842.m003704 Ricinus communis 29842.m003704 N 0.859
30170.m014085 Ricinus communis 30170.m014085 N 0.883
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N 0.883
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.883
Aquca_028_00271 Aquilegia coerulea Aquca_028_00271 N 0.859
AT4G05170 Arabidopsis thaliana AT4G05170 N 0.883
BGIOSGA000686 Oryza indica BGIOSGA000686 N 0.859
BGIOSGA017200 Oryza indica BGIOSGA017200 N 0.859
BGIOSGA020126 Oryza indica BGIOSGA020126 N 0.859
BGIOSGA020128 Oryza indica BGIOSGA020128 N 0.859
BHLH103 Arabidopsis thaliana AT4G21340 N 0.861
BHLH110 Arabidopsis thaliana AT1G27660 N 0.883
BHLH123 Arabidopsis thaliana AT3G20640 N 0.858
BHLH154 Arabidopsis thaliana AT2G31730 N 0.879
Bo01052s010 Brassica oleracea Bo01052s010 N 0.858
Bo3g026410 Brassica oleracea Bo3g026410 N 0.866
Bo3g076150 Brassica oleracea Bo3g076150 N 0.858
Bo4g049510 Brassica oleracea Bo4g049510 N 0.878
Bo9g076250 Brassica oleracea Bo9g076250 N 0.871
Bostr.10689s0083 Boechera stricta Bostr.10689s0083 N 0.861
Bostr.19424s0583 Boechera stricta Bostr.19424s0583 N 0.858
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N 0.913
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N 0.883
Bra001798 Brassica rapa Bra001798 N 0.858
Bra005644 Brassica rapa Bra005644 N 0.878
Bra013520 Brassica rapa Bra013520 N 0.861
Bra029562 Brassica rapa Bra029562 N 0.871
Bra035761 Brassica rapa Bra035761 N 0.845
Cagra.0316s0001 Capsella grandiflora Cagra.0316s0001 N 0.858
Cagra.1062s0002 Capsella grandiflora Cagra.1062s0002 N 0.861
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N 0.883
Carubv10003683m.g Capsella rubella Carubv10003683m.g N 0.883
Carubv10006994m.g Capsella rubella Carubv10006994m.g N 0.861
Carubv10013632m.g Capsella rubella Carubv10013632m.g N 0.858
cassava13240.valid.m1 Manihot esculenta cassava13240.valid.m1 N 0.859
cassava19346.valid.m1 Manihot esculenta cassava19346.valid.m1 N 0.859
cassava21180.m1 Manihot esculenta cassava21180.m1 N 0.879
cassava28105.m1 Manihot esculenta cassava28105.m1 N 0.858
cassava33658.m1 Manihot esculenta cassava33658.m1 N 0.844
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N 0.879
cassava36956.valid.m1 Manihot esculenta cassava36956.valid.m1 N 0.858
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N 0.879
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N 0.879
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.883
Ca_00214 Cicer arietinum Ca_00214 N 0.859
Ca_04928 Cicer arietinum Ca_04928 N 0.883
Ca_06936 Cicer arietinum Ca_06936 N 0.858
Ca_19891 Cicer arietinum Ca_19891 N 0.858
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N 0.883
Ciclev10008228m.g Citrus clementina Ciclev10008228m.g N 0.858
Ciclev10015039m.g Citrus clementina Ciclev10015039m.g N 0.859
Cla003883 Citrullus lanatus Cla003883 N 0.858
Cla011068 Citrullus lanatus Cla011068 N 0.855
Cla021101 Citrullus lanatus Cla021101 N 0.883
Cucsa.059580 Cucumis sativus Cucsa.059580 N 0.858
Cucsa.095280 Cucumis sativus Cucsa.095280 N 0.855
Cucsa.125970 Cucumis sativus Cucsa.125970 N 0.855
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.883
Cucsa.359290 Cucumis sativus Cucsa.359290 N 0.883
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N 0.871
Eucgr.E03614 Eucalyptus grandis Eucgr.E03614 N 0.859
Eucgr.F03384 Eucalyptus grandis Eucgr.F03384 N 0.858
evm.TU.supercontig_12.1 Carica papaya evm.TU.supercontig_12.1 N 0.858
evm.TU.supercontig_27.162 Carica papaya evm.TU.supercontig_27.162 N 0.859
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N 0.883
F775_12027 Aegilops tauschii F775_12027 N 0.859
F775_20405 Aegilops tauschii F775_20405 N 0.859
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N 0.883
gene03259-v1.0-hybrid Fragaria vesca gene03259-v1.0-hybrid N 0.858
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N 0.883
gene30665-v1.0-hybrid Fragaria vesca gene30665-v1.0-hybrid N 0.859
GLYMA06G40760 Glycine max GLYMA06G40760 N 0.858
GLYMA12G17630 Glycine max GLYMA12G17630 N 0.858
GLYMA12G34490 Glycine max GLYMA12G34490 N 0.858
GLYMA13G32320 Glycine max GLYMA13G32320 N 0.859
GLYMA13G36010 Glycine max GLYMA13G36010 N 0.858
GLYMA15G07010 Glycine max GLYMA15G07010 N 0.859
GLYMA16G24661 Glycine max GLYMA16G24661 N 0.846
Gorai.002G079200 Gossypium raimondii Gorai.002G079200 N 0.858
Gorai.006G085000 Gossypium raimondii Gorai.006G085000 N 0.859
Gorai.009G175300 Gossypium raimondii Gorai.009G175300 N 0.859
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.883
Gorai.009G429100 Gossypium raimondii Gorai.009G429100 N 0.858
Gorai.010G147100 Gossypium raimondii Gorai.010G147100 N 0.859
Gorai.011G020100 Gossypium raimondii Gorai.011G020100 N 0.859
GRMZM2G004732 Zea mays GRMZM2G004732 N 0.859
GRMZM2G155217 Zea mays GRMZM2G155217 N 0.859
GRMZM2G313058 Zea mays GRMZM2G313058 N 0.859
GRMZM2G440529 Zea mays GRMZM2G440529 N 0.859
GSMUA_Achr10G04860_001 Musa acuminata GSMUA_Achr10G04860_001 N 0.859
GSMUA_Achr11G18680_001 Musa acuminata GSMUA_Achr11G18680_001 N 0.859
GSMUA_Achr4G33630_001 Musa acuminata GSMUA_Achr4G33630_001 N 0.859
GSMUA_Achr5G26430_001 Musa acuminata GSMUA_Achr5G26430_001 N 0.859
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N 0.883
GSMUA_Achr9G12100_001 Musa acuminata GSMUA_Achr9G12100_001 N 0.859
GSMUA_Achr9G24670_001 Musa acuminata GSMUA_Achr9G24670_001 N 0.859
LjSGA_014369.1 Lotus japonicus LjSGA_014369.1 N 0.859
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N 0.880
LPERR01G28830 Leersia perrieri LPERR01G28830 N 0.859
Lus10007613.g Linum usitatissimum Lus10007613.g N 0.859
Lus10018400.g Linum usitatissimum Lus10018400.g N 0.859
Lus10025987.g Linum usitatissimum Lus10025987.g N 0.859
Lus10038550.g Linum usitatissimum Lus10038550.g N 0.858
MDP0000168695 Malus domestica MDP0000168695 N 0.883
MDP0000262020 Malus domestica MDP0000262020 N 0.883
MDP0000295440 Malus domestica MDP0000295440 N 0.858
MDP0000296508 Malus domestica MDP0000296508 N 0.858
MDP0000301999 Malus domestica MDP0000301999 N 0.859
MDP0000687814 Malus domestica MDP0000687814 N 0.883
mgf001258m Mimulus guttatus mgf001258m N 0.858
mgf008488m Mimulus guttatus mgf008488m N 0.859
mgf013138m Mimulus guttatus mgf013138m N 0.883
mgf016565m Mimulus guttatus mgf016565m N 0.859
MLOC_37666 Hordeum vulgare MLOC_37666 N 0.859
MLOC_57076 Hordeum vulgare MLOC_57076 N 0.883
MLOC_72940 Hordeum vulgare MLOC_72940 N 0.859
MTR_2g011070 Medicago truncatula MTR_2g011070 N 0.859
MTR_2g081820 Medicago truncatula MTR_2g081820 N 0.858
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.883
MTR_8g466800 Medicago truncatula MTR_8g466800 N 0.858
OB04G33270 Oryza brachyantha OB04G33270 N 0.859
OB05G29420 Oryza brachyantha OB05G29420 N 0.859
OB08G14900 Oryza brachyantha OB08G14900 N 0.859
OBART01G33360 Oryza barthii OBART01G33360 N 0.859
OBART04G24870 Oryza barthii OBART04G24870 N 0.859
OBART05G21860 Oryza barthii OBART05G21860 N 0.859
OGLUM01G37590 Oryza glumaepatula OGLUM01G37590 N 0.859
OGLUM04G26290 Oryza glumaepatula OGLUM04G26290 N 0.859
OGLUM05G23050 Oryza glumaepatula OGLUM05G23050 N 0.859
OLONG_006510 Oryza longistaminata OLONG_006510 N 0.859
OLONG_021979 Oryza longistaminata OLONG_021979 N 0.883
OLONG_026655 Oryza longistaminata OLONG_026655 N 0.859
OMERI01G30260 Oryza meridionalis OMERI01G30260 N 0.859
OMERI04G21930 Oryza meridionalis OMERI04G21930 N 0.859
OMERI12G12400 Oryza meridionalis OMERI12G12400 N 0.859
ONIVA01G38120 Oryza nivara ONIVA01G38120 N 0.859
ONIVA03G13290 Oryza nivara ONIVA03G13290 N 0.859
ONIVA05G22530 Oryza nivara ONIVA05G22530 N 0.859
OPUNC01G00360 Oryza punctata OPUNC01G00360 N 0.883
OPUNC01G32440 Oryza punctata OPUNC01G32440 N 0.859
OPUNC04G23980 Oryza punctata OPUNC04G23980 N 0.859
orange1.1g011373m.g Citrus sinensis orange1.1g011373m.g N 0.859
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N 0.883
ORGLA04G0213700 Oryza glaberrima ORGLA04G0213700 N 0.859
ORGLA05G0190400 Oryza glaberrima ORGLA05G0190400 N 0.859
ORUFI01G36520 Oryza rufipogon ORUFI01G36520 N 0.859
ORUFI05G23130 Oryza rufipogon ORUFI05G23130 N 0.859
ORUFI06G19010 Oryza rufipogon ORUFI06G19010 N 0.859
OS04G0631600 Oryza sativa OS04G0631600 N 0.859
Pavir.Ea03112 Panicum virgatum Pavir.Ea03112 N 0.859
Pavir.Eb03429 Panicum virgatum Pavir.Eb03429 N 0.859
Pavir.Ga00384 Panicum virgatum Pavir.Ga00384 N 0.859
Pavir.J10443 Panicum virgatum Pavir.J10443 N 0.859
Pavir.J13928 Panicum virgatum Pavir.J13928 N 0.859
Pavir.J25904 Panicum virgatum Pavir.J25904 N 0.859
PDK_20s1457351g001 Phoenix dactylifera PDK_20s1457351g001 N 0.859
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.883
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.883
PGSC0003DMG400005064 Solanum tuberosum PGSC0003DMG400005064 N 0.858
PGSC0003DMG400013875 Solanum tuberosum PGSC0003DMG400013875 N 0.859
PGSC0003DMG400019236 Solanum tuberosum PGSC0003DMG400019236 N 0.858
PGSC0003DMG400025020 Solanum tuberosum PGSC0003DMG400025020 N 0.858
PK14284.1 Cannabis sativa PK14284.1 N 0.859
PK22680.1 Cannabis sativa PK22680.1 N 0.858
Pm005865 Prunus mume Pm005865 N 0.883
Pm007388 Prunus mume Pm007388 N 0.879
Pm009855 Prunus mume Pm009855 N 0.859
Pm011692 Prunus mume Pm011692 N 0.858
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N 0.883
POPTR_0004s02870 Populus trichocarpa POPTR_0004s02870 N 0.859
POPTR_0005s12150 Populus trichocarpa POPTR_0005s12150 N 0.859
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.883
POPTR_0007s13360 Populus trichocarpa POPTR_0007s13360 N 0.859
POPTR_0011s03560 Populus trichocarpa POPTR_0011s03560 N 0.859
POPTR_0011s13320 Populus trichocarpa POPTR_0011s13320 N 0.858
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N 0.879
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N 0.879
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.883
PRUPE_ppa005924mg Prunus persica PRUPE_ppa005924mg N 0.859
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N 0.879
PRUPE_ppa023041mg Prunus persica PRUPE_ppa023041mg N 0.858
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N 0.883
SapurV1A.0028s0510 Salix purpurea SapurV1A.0028s0510 N 0.859
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.883
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N 0.879
SapurV1A.0441s0120 Salix purpurea SapurV1A.0441s0120 N 0.859
SapurV1A.0694s0030 Salix purpurea SapurV1A.0694s0030 N 0.858
SapurV1A.1304s0050 Salix purpurea SapurV1A.1304s0050 N 0.859
Sb03g008830 Sorghum bicolor Sb03g008830 N 0.883
Sb03g036670 Sorghum bicolor Sb03g036670 N 0.859
Sb07g004980 Sorghum bicolor Sb07g004980 N 0.859
Sb09g024720 Sorghum bicolor Sb09g024720 N 0.859
Si001796m.g Setaria italica Si001796m.g N 0.859
Si010139m.g Setaria italica Si010139m.g N 0.859
Si013853m.g Setaria italica Si013853m.g N 0.859
Si022548m.g Setaria italica Si022548m.g N 0.859
Solyc02g079760.2 Solanum lycopersicum Solyc02g079760.2 N 0.859
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N 0.883
Solyc03g031450.2 Solanum lycopersicum Solyc03g031450.2 N 0.859
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.883
Solyc07g063830.2 Solanum lycopersicum Solyc07g063830.2 N 0.858
Solyc10g006640.2 Solanum lycopersicum Solyc10g006640.2 N 0.858
TCM_019871 Theobroma cacao TCM_019871 N 0.879
TCM_030051 Theobroma cacao TCM_030051 N 0.859
TCM_031172 Theobroma cacao TCM_031172 N 0.858
TCM_034098 Theobroma cacao TCM_034098 N 0.883
Thhalv10017421m.g Eutrema salsugineum Thhalv10017421m.g N 0.878
Thhalv10020666m.g Eutrema salsugineum Thhalv10020666m.g N 0.858
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N 0.883
Traes_2AL_70AE1B8B8 Triticum aestivum Traes_2AL_70AE1B8B8 N 0.859
Traes_2BL_A014BCC51 Triticum aestivum Traes_2BL_A014BCC51 N 0.859
Traes_2BL_E82F7902D Triticum aestivum Traes_2BL_E82F7902D N 0.859
Traes_2DL_DCD7B13A8 Triticum aestivum Traes_2DL_DCD7B13A8 N 0.859
TRIUR3_00968 Triticum urartu TRIUR3_00968 N 0.859
VIT_00s0274g00070 Vitis vinifera VIT_00s0274g00070 N 0.859
VIT_04s0023g02410 Vitis vinifera VIT_04s0023g02410 N 0.859
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N 0.902
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.883
VIT_19s0014g04670 Vitis vinifera VIT_19s0014g04670 N 0.858