PDK_20s1377121g004 (Phoenix dactylifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 PDK_20s1377121g004 T052237_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.858 0.620
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.858 0.620
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.858 0.620
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.858 0.600
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.858 0.600
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.845 0.620
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1377121g004 bHLH 172 221

Links

Other bHLH family TFs
Other Phoenix dactylifera TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_0246s0050 Medicago truncatula MTR_0246s0050 I 0.870
MTR_4g098035 Medicago truncatula MTR_4g098035 I 0.870
GLYMA02G09670 Glycine max GLYMA02G09670 I 0.869
Bra024992 Brassica rapa Bra024992 I 0.869
Cla008954 Citrullus lanatus Cla008954 I 0.866
Cucsa.321840 Cucumis sativus Cucsa.321840 I 0.866
Ca_11514 Cicer arietinum Ca_11514 I 0.858
Ca_12352 Cicer arietinum Ca_12352 I 0.858
PK18474.1 Cannabis sativa PK18474.1 D 0.858
Pm023237 Prunus mume Pm023237 I 0.858
mgf002775m Mimulus guttatus mgf002775m I 0.858
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.858
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.858
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.858
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.858
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.858
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.858
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.858
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.858
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.858
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.858
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.858
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.858
MDP0000029168 Malus domestica MDP0000029168 I 0.858
MDP0000136498 Malus domestica MDP0000136498 I 0.858
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.858
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.858
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.858
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.858
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.858
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.858
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.858
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.858
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.858
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.858
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.858
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.858
Bra017523 Brassica rapa Bra017523 I 0.858
Bra013263 Brassica rapa Bra013263 I 0.858
Bra010178 Brassica rapa Bra010178 I 0.858
Bra017527 Brassica rapa Bra017527 I 0.858
Bra024998 Brassica rapa Bra024998 I 0.858
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.858
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.858
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.858
Bo9g065530 Brassica oleracea Bo9g065530 I 0.858
Bo8g028850 Brassica oleracea Bo8g028850 I 0.858
MYC3 Arabidopsis thaliana AT5G46760 D 0.858
MYC4 Arabidopsis thaliana AT4G17880 D 0.858
MYC2 Arabidopsis thaliana AT1G32640 D 0.858
Bo01130s010 Brassica oleracea Bo01130s010 I 0.858
Bo1g017990 Brassica oleracea Bo1g017990 I 0.858
Bo7g075710 Brassica oleracea Bo7g075710 I 0.858
Bo5g086990 Brassica oleracea Bo5g086990 I 0.858
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.858
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.858
Bo7g075820 Brassica oleracea Bo7g075820 I 0.856
Ca_09378 Cicer arietinum Ca_09378 I 0.856
Bra024993 Brassica rapa Bra024993 I 0.856
MTR_4g097950 Medicago truncatula MTR_4g097950 I 0.856
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.854
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.854
GLYMA05G23530 Glycine max GLYMA05G23530 I 0.854
GLYMA17G16720 Glycine max GLYMA17G16720 I 0.854
PGSC0003DMG400005528 Solanum tuberosum PGSC0003DMG400005528 I 0.849
Si021549m.g Setaria italica Si021549m.g I 0.849
PGSC0003DMG400012237 Solanum tuberosum PGSC0003DMG400012237 I 0.849
gene01894-v1.0-hybrid Fragaria vesca gene01894-v1.0-hybrid I 0.849
MTR_8g024770 Medicago truncatula MTR_8g024770 I 0.849
AMTR_s00121p00026620 Amborella trichopoda AMTR_s00121p00026620 I 0.849
Pavir.Ca00449 Panicum virgatum Pavir.Ca00449 I 0.849
Pavir.Cb01851 Panicum virgatum Pavir.Cb01851 I 0.849
MTR_8g024790 Medicago truncatula MTR_8g024790 I 0.849
PGSC0003DMG400005860 Solanum tuberosum PGSC0003DMG400005860 I 0.849
Pm029399 Prunus mume Pm029399 I 0.849
Solyc08g083170.1 Solanum lycopersicum Solyc08g083170.1 I 0.849
Solyc08g008600.2 Solanum lycopersicum Solyc08g008600.2 I 0.849
PRUPE_ppa005343mg Prunus persica PRUPE_ppa005343mg I 0.849
Solyc10g009290.1 Solanum lycopersicum Solyc10g009290.1 I 0.849
Sb09g008120 Sorghum bicolor Sb09g008120 I 0.849
GSMUA_Achr7G04720_001 Musa acuminata GSMUA_Achr7G04720_001 I 0.845
GSMUA_Achr8G05170_001 Musa acuminata GSMUA_Achr8G05170_001 I 0.845
chr2.CM0021.440.nc Lotus japonicus chr2.CM0021.440.nc I 0.845
BHLH13 Arabidopsis thaliana AT1G01260 D 0.845
GSMUA_Achr8G14720_001 Musa acuminata GSMUA_Achr8G14720_001 I 0.845
Thhalv10007139m.g Eutrema salsugineum Thhalv10007139m.g I 0.845
Bo5g002590 Brassica oleracea Bo5g002590 I 0.845
Thhalv10000853m.g Eutrema salsugineum Thhalv10000853m.g I 0.845
GSMUA_Achr11G17840_001 Musa acuminata GSMUA_Achr11G17840_001 I 0.845
Bra033273 Brassica rapa Bra033273 I 0.845
GSMUA_Achr2G18140_001 Musa acuminata GSMUA_Achr2G18140_001 I 0.845
Cagra.1968s0070 Capsella grandiflora Cagra.1968s0070 I 0.845
fgenesh2_kg.1__101__AT1G01260.1 Arabidopsis lyrata fgenesh2_kg.1__101__AT1G01260.1 I 0.845
Carubv10008640m.g Capsella rubella Carubv10008640m.g I 0.845
Bostr.5325s0049 Boechera stricta Bostr.5325s0049 I 0.845
GSMUA_AchrUn_randomG02900_001 Musa acuminata GSMUA_AchrUn_randomG02900_001 I 0.845
PDK_20s1524891g001 Phoenix dactylifera PDK_20s1524891g001 I 0.844
GSMUA_Achr7G00800_001 Musa acuminata GSMUA_Achr7G00800_001 I 0.844
GSMUA_Achr4G23070_001 Musa acuminata GSMUA_Achr4G23070_001 I 0.844
Ca_02263 Cicer arietinum Ca_02263 I 0.844
Eucgr.E01043 Eucalyptus grandis Eucgr.E01043 I 0.842