CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1611511g001
(
Phoenix dactylifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
PDK_20s1611511g001
T052267_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.845
0.653
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1611511g001
bHLH
146
194
HDEHVIAERKRREKLSQRFIELSAVIPGLKKRDKASVLEEAAKYVKQLE
Links
Other
bHLH
family TFs
Other
Phoenix dactylifera
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.H02398
Eucalyptus grandis
Eucgr.H02398
I
0.869
GSMUA_Achr3G26180_001
Musa acuminata
GSMUA_Achr3G26180_001
I
0.866
GSMUA_Achr3G30620_001
Musa acuminata
GSMUA_Achr3G30620_001
I
0.866
GSMUA_Achr4G03160_001
Musa acuminata
GSMUA_Achr4G03160_001
I
0.866
GSMUA_Achr7G27600_001
Musa acuminata
GSMUA_Achr7G27600_001
I
0.866
GSMUA_Achr7G00800_001
Musa acuminata
GSMUA_Achr7G00800_001
I
0.866
estExt_fgenesh1_pg.C_420092
Physcomitrella patens
estExt_fgenesh1_pg.C_420092
I
0.866
estExt_fgenesh1_pg.C_310143
Physcomitrella patens
estExt_fgenesh1_pg.C_310143
I
0.866
PDK_20s1524891g001
Phoenix dactylifera
PDK_20s1524891g001
I
0.866
Cla014288
Citrullus lanatus
Cla014288
I
0.854
Cucsa.103630
Cucumis sativus
Cucsa.103630
I
0.853
Gorai.007G229000
Gossypium raimondii
Gorai.007G229000
I
0.845
MDP0000170202
Malus domestica
MDP0000170202
I
0.845
TCM_000894
Theobroma cacao
TCM_000894
I
0.845
evm.TU.supercontig_20.63
Carica papaya
evm.TU.supercontig_20.63
I
0.845
AT2G22750
Arabidopsis thaliana
AT2G22750
D
0.845
PDK_20s1394471g002
Phoenix dactylifera
PDK_20s1394471g002
I
0.845
Thhalv10000426m.g
Eutrema salsugineum
Thhalv10000426m.g
I
0.845
Bo4g150960
Brassica oleracea
Bo4g150960
I
0.845
Bra039924
Brassica rapa
Bra039924
I
0.845
Bra030210
Brassica rapa
Bra030210
I
0.845
PGSC0003DMG400005101
Solanum tuberosum
PGSC0003DMG400005101
I
0.845
Solyc01g106460.2
Solanum lycopersicum
Solyc01g106460.2
I
0.845
MDP0000159571
Malus domestica
MDP0000159571
I
0.845
Gorai.003G034600
Gossypium raimondii
Gorai.003G034600
I
0.845
Eucgr.H02390
Eucalyptus grandis
Eucgr.H02390
I
0.842
Eucgr.I00634
Eucalyptus grandis
Eucgr.I00634
I
0.842
Eucgr.H02389
Eucalyptus grandis
Eucgr.H02389
I
0.842
Eucgr.I02518
Eucalyptus grandis
Eucgr.I02518
I
0.842
Ciclev10028925m.g
Citrus clementina
Ciclev10028925m.g
I
0.842
Carubv10025041m.g
Capsella rubella
Carubv10025041m.g
I
0.842
Cucsa.218800
Cucumis sativus
Cucsa.218800
I
0.842
cassava37087.valid.m1
Manihot esculenta
cassava37087.valid.m1
I
0.842
cassava35671.valid.m1
Manihot esculenta
cassava35671.valid.m1
I
0.842
cassava20178.m1
Manihot esculenta
cassava20178.m1
I
0.842
Aquca_010_00012
Aquilegia coerulea
Aquca_010_00012
I
0.842
Cagra.5392s0006
Capsella grandiflora
Cagra.5392s0006
I
0.842
Ciclev10027158m.g
Citrus clementina
Ciclev10027158m.g
I
0.842
evm.TU.supercontig_129.37
Carica papaya
evm.TU.supercontig_129.37
I
0.842
Carubv10006834m.g
Capsella rubella
Carubv10006834m.g
I
0.842
Cagra.6066s0006
Capsella grandiflora
Cagra.6066s0006
I
0.842
Ciclev10027504m.g
Citrus clementina
Ciclev10027504m.g
I
0.842
Gorai.008G087600
Gossypium raimondii
Gorai.008G087600
I
0.842
Pavir.J35103
Panicum virgatum
Pavir.J35103
I
0.842
Pavir.J01849
Panicum virgatum
Pavir.J01849
I
0.842
orange1.1g037441m.g
Citrus sinensis
orange1.1g037441m.g
I
0.842
orange1.1g026436m.g
Citrus sinensis
orange1.1g026436m.g
I
0.842
SapurV1A.0019s0910
Salix purpurea
SapurV1A.0019s0910
I
0.842
SapurV1A.0279s0180
Salix purpurea
SapurV1A.0279s0180
I
0.842
PK11573.1
Cannabis sativa
PK11573.1
I
0.842
PK09122.1
Cannabis sativa
PK09122.1
I
0.842
Thhalv10025715m.g
Eutrema salsugineum
Thhalv10025715m.g
I
0.842
SapurV1A.3034s0010
Salix purpurea
SapurV1A.3034s0010
I
0.842
orange1.1g021208m.g
Citrus sinensis
orange1.1g021208m.g
I
0.842
MDP0000502440
Malus domestica
MDP0000502440
I
0.842
Gorai.007G228900
Gossypium raimondii
Gorai.007G228900
I
0.842
Gorai.003G034700
Gossypium raimondii
Gorai.003G034700
I
0.842
Gorai.002G211500
Gossypium raimondii
Gorai.002G211500
I
0.842
gene05612-v1.0-hybrid
Fragaria vesca
gene05612-v1.0-hybrid
I
0.842
cassava18197.valid.m1
Manihot esculenta
cassava18197.valid.m1
I
0.842
Lus10003488.g
Linum usitatissimum
Lus10003488.g
I
0.842
MDP0000318216
Malus domestica
MDP0000318216
I
0.842
MDP0000291132
Malus domestica
MDP0000291132
I
0.842
MDP0000174149
Malus domestica
MDP0000174149
I
0.842
Lus10039639.g
Linum usitatissimum
Lus10039639.g
I
0.842
gene05610-v1.0-hybrid
Fragaria vesca
gene05610-v1.0-hybrid
I
0.842
29804.m001498
Ricinus communis
29804.m001498
I
0.842
GSMUA_AchrUn_randomG15440_001
Musa acuminata
GSMUA_AchrUn_randomG15440_001
I
0.842
LPERR03G27220
Leersia perrieri
LPERR03G27220
I
0.842
GSMUA_Achr8G05170_001
Musa acuminata
GSMUA_Achr8G05170_001
I
0.842
GSMUA_Achr4G23070_001
Musa acuminata
GSMUA_Achr4G23070_001
I
0.842
GSMUA_Achr2G08590_001
Musa acuminata
GSMUA_Achr2G08590_001
I
0.842
OBART03G32580
Oryza barthii
OBART03G32580
I
0.842
OGLUM03G32210
Oryza glumaepatula
OGLUM03G32210
I
0.842
ORGLA03G0295100
Oryza glaberrima
ORGLA03G0295100
I
0.842
ORUFI03G33950
Oryza rufipogon
ORUFI03G33950
I
0.842
OPUNC03G29750
Oryza punctata
OPUNC03G29750
I
0.842
ONIVA03G34090
Oryza nivara
ONIVA03G34090
I
0.842
cassava16019.m1
Manihot esculenta
cassava16019.m1
I
0.842
GRMZM2G082343
Zea mays
GRMZM2G082343
I
0.842
GRMZM2G019806
Zea mays
GRMZM2G019806
I
0.842
Bo3g153150
Brassica oleracea
Bo3g153150
I
0.842
Bra010617
Brassica rapa
Bra010617
I
0.842
Bo1g003350
Brassica oleracea
Bo1g003350
I
0.842
BGIOSGA013493
Oryza indica
BGIOSGA013493
I
0.842
BHLH25
Arabidopsis thaliana
AT4G37850
I
0.842
Bra011790
Brassica rapa
Bra011790
I
0.842
Bra013128
Brassica rapa
Bra013128
I
0.842
GLYMA11G04690
Glycine max
GLYMA11G04690
I
0.842
GLYMA08G06831
Glycine max
GLYMA08G06831
I
0.842
GLYMA07G30420
Glycine max
GLYMA07G30420
I
0.842
fgenesh2_kg.4__196__AT2G22750.1
Arabidopsis lyrata
fgenesh2_kg.4__196__AT2G22750.1
I
0.842
OS03G0725800
Oryza sativa
OS03G0725800
I
0.842
OMERI03G29350
Oryza meridionalis
OMERI03G29350
I
0.842
VIT_00s0824g00020
Vitis vinifera
VIT_00s0824g00020
I
0.842
VIT_00s0927g00010
Vitis vinifera
VIT_00s0927g00010
I
0.842
TCM_000895
Theobroma cacao
TCM_000895
I
0.842
Solyc02g091800.2
Solanum lycopersicum
Solyc02g091800.2
I
0.842
Si036393m.g
Setaria italica
Si036393m.g
I
0.842
VIT_03s0088g01240
Vitis vinifera
VIT_03s0088g01240
I
0.842
VIT_07s0205g00160
Vitis vinifera
VIT_07s0205g00160
I
0.842
Pm002305
Prunus mume
Pm002305
I
0.842
Cla000123
Citrullus lanatus
Cla000123
I
0.842
Ca_02263
Cicer arietinum
Ca_02263
I
0.842
28179.m000478
Ricinus communis
28179.m000478
I
0.842
Pm021008
Prunus mume
Pm021008
I
0.842
SELMODRAFT_48361
Selaginella moellendorffii
SELMODRAFT_48361
I
0.842
PRUPE_ppa008130mg
Prunus persica
PRUPE_ppa008130mg
I
0.842
PRUPE_ppa017640mg
Prunus persica
PRUPE_ppa017640mg
I
0.842
POPTR_0009s08500
Populus trichocarpa
POPTR_0009s08500
I
0.842
POPTR_0005s09810
Populus trichocarpa
POPTR_0005s09810
I
0.842
POPTR_0001s29400
Populus trichocarpa
POPTR_0001s29400
I
0.842
SELMODRAFT_34848
Selaginella moellendorffii
SELMODRAFT_34848
I
0.842
AMTR_s00033p00078670
Amborella trichopoda
AMTR_s00033p00078670
I
0.842
28179.m000479
Ricinus communis
28179.m000479
I
0.842
Sb01g009590
Sorghum bicolor
Sb01g009590
I
0.842
PDK_20s1524891g002
Phoenix dactylifera
PDK_20s1524891g002
I
0.841
chr5.CM0158.350.nd
Lotus japonicus
chr5.CM0158.350.nd
I
0.840
chr3.LjT47G05.50.nc
Lotus japonicus
chr3.LjT47G05.50.nc
I
0.840
chr2.CM0021.410.nc
Lotus japonicus
chr2.CM0021.410.nc
I
0.840
LjT17L12.80.nd
Lotus japonicus
LjT17L12.80.nd
I
0.839
chr2.CM0021.380.nc
Lotus japonicus
chr2.CM0021.380.nc
I
0.839
GLYMA17G16720
Glycine max
GLYMA17G16720
I
0.839
Lus10020503.g
Linum usitatissimum
Lus10020503.g
I
0.839
Lus10012457.g
Linum usitatissimum
Lus10012457.g
I
0.839
POPTR_0007s14480
Populus trichocarpa
POPTR_0007s14480
I
0.839
Lus10039640.g
Linum usitatissimum
Lus10039640.g
I
0.839
Eucgr.H02396
Eucalyptus grandis
Eucgr.H02396
I
0.839
GLYMA05G23530
Glycine max
GLYMA05G23530
I
0.839
gene07355-v1.0-hybrid
Fragaria vesca
gene07355-v1.0-hybrid
I
0.839
TCM_006357
Theobroma cacao
TCM_006357
I
0.839
SapurV1A.0821s0050
Salix purpurea
SapurV1A.0821s0050
I
0.839