AMEM004741 (Anopheles merus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 AMEM004741 T052904_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HLH4C
M03609_2.00
Drosophila melanogaster
DDNCRCAGCTGYGNHH

DDNCRCAGCTGYGNHH
SELEX
Nitta et al.(2015)
HLH4C_1
0.911 0.942
HLH4C
M03610_2.00
Drosophila melanogaster
DRSMYCAGCTGVKSYH

DRSMBCAGCTGRKSYH
SELEX
Nitta et al.(2015)
HLH4C_2
0.911 0.942
HLH4C
M03611_2.00
Drosophila melanogaster
NRBMYCAGCTGYGNHH

DDNCRCAGCTGRKVYN
SELEX
Nitta et al.(2015)
HLH4C_3
0.911 0.942
HLH4C
M05963_2.00
Drosophila melanogaster
CACCTGMDCC

GGHKCAGGTG
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_3_FBgn0011277
0.911 0.942
HLH4C
M05964_2.00
Drosophila melanogaster
MCAYCTGMGMMM

KKKCKCAGRTGK
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_4_FBgn0011277
0.911 0.942
HLH4C
M05965_2.00
Drosophila melanogaster
VNHHVCACCTGMBNC

GNVKCAGGTGBDDNB
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_FBgn0011277
0.911 0.942
HLH4C
M05966_2.00
Drosophila melanogaster
RGSMYCAGCTGCGYY

RRCGCAGCTGRKSCY
B1H
Zhu et al.(2011)
HLH4C_SANGER_5_FBgn0011277
0.911 0.942
NHLH1
M02796_2.00
Homo sapiens
CGCAGCTGCB

VGCAGCTGCG
SELEX
Jolma et al.(2013)
NHLH1_1
0.894 0.942
NHLH1
M02797_2.00
Homo sapiens
VGCAGCTGCK

MGCAGCTGCB
SELEX
Jolma et al.(2013)
NHLH1_2
0.894 0.942
NHLH1
M04162_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
0.894 0.942
NHLH1
M04164_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
0.894 0.942
Nhlh1
M08773_2.00
Mus musculus
BKGGNMNCAGCTGCGBCCYY

RRGGVCGCAGCTGNKNCCMV
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
0.894 0.942
NHLH1
M09875_2.00
Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN

NNNGGNCBCAGCTGBKNCCHNN
Transfac
Matys et al.(2006)
V$HEN1_01
0.894 0.942
NHLH1
M09876_2.00
Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN

NDDGGNMKCAGCTGCKBCCYHN
Transfac
Matys et al.(2006)
V$HEN1_02
0.894 0.942
NHLH1
M04163_2.00
Homo sapiens
NRGBMKCAGCTGCGYCCH

DGGRCGCAGCTGMKVCYN
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
0.894 0.942
NHLH1
M04165_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
0.894 0.942
Nhlh2
M00756_2.00
Mus musculus
NKCAGCTGHN

NDCAGCTGMN
PBM
Weirauch et al.(2013)
pTH3037
0.894 0.923
NHLH2
M04177_2.00
Homo sapiens
DDGNMGCAGCTGCGYCMH

DKGRCGCAGCTGCKNCHH
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
0.894 0.923
NHLH2
M09878_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEN2_Q2
0.894 0.923
NHLH2
M04178_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
0.894 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEM004741-PA bHLH 85 137

Links

Other bHLH family TFs
Other Anopheles merus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29613.m000367 Ricinus communis 29613.m000367 N 0.000
30099.m001671 Ricinus communis 30099.m001671 N 0.000
30099.m001672 Ricinus communis 30099.m001672 N 0.000
AGL28 Arabidopsis thaliana AT1G01530 N 0.000
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.000
AGL61 Arabidopsis thaliana AT2G24840 N 0.000
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.000
AGL62 Arabidopsis thaliana AT5G60440 I 0.000
AGL91 Arabidopsis thaliana AT3G66656 D 0.000
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.000
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.000
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.000
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.000
Bo1g112460 Brassica oleracea Bo1g112460 N 0.000
Bo2g024870 Brassica oleracea Bo2g024870 N 0.000
Bo4g070340 Brassica oleracea Bo4g070340 N 0.000
Bo4g157220 Brassica oleracea Bo4g157220 N 0.000
Bo4g165540 Brassica oleracea Bo4g165540 N 0.000
Bo5g113750 Brassica oleracea Bo5g113750 N 0.000
Bo8g099550 Brassica oleracea Bo8g099550 N 0.000
Bo9g142570 Brassica oleracea Bo9g142570 N 0.000
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.000
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.000
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.000
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.000
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.000
Bra002480 Brassica rapa Bra002480 N 0.000
Bra007829 Brassica rapa Bra007829 N 0.000
Bra011938 Brassica rapa Bra011938 N 0.000
Bra020247 Brassica rapa Bra020247 N 0.000
Bra022434 Brassica rapa Bra022434 N 0.000
Bra026764 Brassica rapa Bra026764 N 0.000
Bra032057 Brassica rapa Bra032057 N 0.000
Bra038225 Brassica rapa Bra038225 N 0.000
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.000
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.000
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.000
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.000
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.000
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.000
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.000
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.000
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.000
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.000
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.000
Ca_04658 Cicer arietinum Ca_04658 N 0.000
Ca_04659 Cicer arietinum Ca_04659 N 0.000
Ca_04660 Cicer arietinum Ca_04660 N 0.000
Ca_04661 Cicer arietinum Ca_04661 N 0.000
Ca_04662 Cicer arietinum Ca_04662 N 0.000
Ca_04665 Cicer arietinum Ca_04665 N 0.000
Ca_07607 Cicer arietinum Ca_07607 N 0.000
Ca_18845 Cicer arietinum Ca_18845 N 0.000
Ca_24185 Cicer arietinum Ca_24185 I 0.000
Ca_26354 Cicer arietinum Ca_26354 N 0.000
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.000
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.000
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.000
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.000
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.000
chr5.LjT25B19.200.nd Lotus japonicus chr5.LjT25B19.200.nd N 0.000
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.000
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.000
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.000
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.000
Cla006571 Citrullus lanatus Cla006571 N 0.000
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.000
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.000
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.000
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.000
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.000
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.000
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.000
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.000
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.000
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.000
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.000
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.000
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.000
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.000
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.000
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.000
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.000
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.000
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.000
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.000
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.000
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.000
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.000
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.000
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.000
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.000
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.000
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.000
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.000
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.000
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.000
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.000
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.000
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.000
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.000
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.000
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.000
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.000
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.000
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.000
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.000
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.000
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.000
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.000
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.000
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.000
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.000
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.000
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.000
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.000
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.000
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.000
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.000
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.000
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.000
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.000
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.000
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.000
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.000
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.000
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.000
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.000
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.000
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.000
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.000
MDP0000168914 Malus domestica MDP0000168914 N 0.000
MDP0000221590 Malus domestica MDP0000221590 N 0.000
MDP0000233925 Malus domestica MDP0000233925 N 0.000
MDP0000278770 Malus domestica MDP0000278770 N 0.000
MDP0000434703 Malus domestica MDP0000434703 I 0.000
mgf018529m Mimulus guttatus mgf018529m N 0.000
mgf020533m Mimulus guttatus mgf020533m N 0.000
mgf022147m Mimulus guttatus mgf022147m N 0.000
mgf022403m Mimulus guttatus mgf022403m N 0.000
mgf023207m Mimulus guttatus mgf023207m N 0.000
mgf024307m Mimulus guttatus mgf024307m N 0.000
mgf024490m Mimulus guttatus mgf024490m N 0.000
mgf025566m Mimulus guttatus mgf025566m N 0.000
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.000
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.000
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.000
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.000
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.000
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.000
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.000
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.000
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.000
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.000
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.000
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.000
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.000
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.000
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.000
MTR_8g086290 Medicago truncatula MTR_8g086290 N 0.000
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.000
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.000
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.000
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.000
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.000
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.000
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.000
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.000
Pm016629 Prunus mume Pm016629 N 0.000
Pm021018 Prunus mume Pm021018 N 0.000
Pm021070 Prunus mume Pm021070 N 0.000
Pm021071 Prunus mume Pm021071 N 0.000
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.000
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.000
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.000
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.000
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.000
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.000
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.000
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.000
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.000
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.000
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.000
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.000
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.000
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.000
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.000
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.000
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.000
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.000
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.000
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.000
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.000
TCM_006323 Theobroma cacao TCM_006323 N 0.000
TCM_006324 Theobroma cacao TCM_006324 N 0.000
TCM_040735 Theobroma cacao TCM_040735 N 0.000
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.000
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.000
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.000
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.000
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.000
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.000
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.000
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.000
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.000
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.000
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.000
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.000
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.000
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.000
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.000
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.000