CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000941800
(
Globodera pallida
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
GPLIN_000941800
T054004_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.852
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000941800
bHLH
123
174
RRQIANCNERRRMQSINAGFQALRQLLPRKDGDKMSKAAILAATAEFIHSLL
Links
Other
bHLH
family TFs
Other
Globodera pallida
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy