HCOI02168200 (Haemonchus contortus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 HCOI02168200 T054091_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-1
M00746_2.00 		Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY		 PBM
DeMasi et al.(2011)
HLH-1 		0.914 0.942
hlh-1
M00929_2.00 		Caenorhabditis elegans
GACAGCTG
CAGCTGTC		 PBM
Grove et al.(2009)
HLH1 		0.914 0.942
hlh-1
M08063_2.00 		Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB		 ChIP-seq
Mathelier et al.(2014)
MA0545.1 		0.914 0.942
hlh-1
M09481_2.00 		Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN		 Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode 		0.914 0.942
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI02168200.t1 bHLH 137 188
HCOI02168200.t2 bHLH 137 188
HCOI02168200.t3 bHLH 135 186

Links

Other bHLH family TFs
Other Haemonchus contortus TFs

Invalid Input OrderBy

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action