L898_g465 (Steinernema monticolum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 L898_g465 T054385_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB

VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.846 0.627
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD

HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.846 0.627
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.846 0.627
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY

RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.846 0.627
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB

VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.846 0.627
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY

RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.846 0.627
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH

DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.846 0.627
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN

NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.846 0.627
SREBF1
M09796_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.846 0.627
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB

VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.846 0.627
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC

GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.846 0.627
SREBF1
M09799_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.846 0.627
SREBF1
M09800_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.846 0.627
SREBF1
M09801_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.846 0.627
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY

RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.846 0.627
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY

RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.846 0.627
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g465.t1 bHLH 394 444

Links

Other bHLH family TFs
Other Steinernema monticolum TFs

Invalid Input OrderBy

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action